Gene
| Gene Model ID | pfu_aug2.0_426.1_20756 |
|---|---|
| Locus | scaffold426.1 : 101506 ... 117945 : - |
| To GenomeBrowser | scaffold426.1:101506..117945 |
| Genes list of scaffold | scaffold426.1 |
| Synonym | pfu_aug1.0_4452.1_23580 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_426.1_20756.t2 | 4 | 1 | Jnk-SapK_ap_N | 24 | 173 | 5.4e-17 | 62.2 | 1.8e-20 | 5.4e-17 | 62.2 |
| pfu_aug2.0_426.1_20756.t2 | 5 | 1 | RILP | 120 | 120 | 1.3e-09 | 38.0 | 1.5 | 4500.0 | -2.1 |
| pfu_aug2.0_426.1_20756.t2 | 5 | 2 | RILP | 171 | 208 | 1.3e-09 | 38.0 | 1.4 | 4200.0 | -2.1 |
| pfu_aug2.0_426.1_20756.t2 | 4 | 2 | Jnk-SapK_ap_N | 186 | 257 | 5.4e-17 | 62.2 | 5.0 | 15000.0 | -4.8 |
| pfu_aug2.0_426.1_20756.t2 | 5 | 3 | RILP | 243 | 244 | 1.3e-09 | 38.0 | 2.9 | 8600.0 | -3.1 |
| pfu_aug2.0_426.1_20756.t2 | 4 | 3 | Jnk-SapK_ap_N | 283 | 339 | 5.4e-17 | 62.2 | 2.1 | 6100.0 | -3.0 |
| pfu_aug2.0_426.1_20756.t2 | 5 | 4 | RILP | 318 | 318 | 1.3e-09 | 38.0 | 2.0 | 5800.0 | -2.5 |
| pfu_aug2.0_426.1_20756.t2 | 5 | 5 | RILP | 428 | 458 | 1.3e-09 | 38.0 | 4.4e-13 | 1.3e-09 | 38.0 |
| pfu_aug2.0_426.1_20756.t2 | 4 | 4 | Jnk-SapK_ap_N | 438 | 454 | 5.4e-17 | 62.2 | 0.4 | 1200.0 | -0.7 |
Transcript
| Transcript ID | pfu_aug2.0_426.1_20756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20756.t1 atggatccgtacaaagaaaggcgcgatatcatggacgaagacttactagaggttgtgtcagtggttgatgtgtacgatca agcagcagagattgggaaagagtttgaaaaactgatagagggacatggagttgaggcagtaacggatttgatgccaaaag tgataaaatctttagaacaattagagcttctggccagcaagtatgaaaaagaaagtagtgaaataaatgaacttcgttca atgatagagaaacttgagacagaaaagaatgaacgagctcaagaaaggttgcgttatgaggaggaacttttacaaataga ggagaactggcagagggaaacacgggagttggtgaaatcggtgagtcgattacaggatgagaaccagaaactacgggcaa acttagtggacaccaaggaagctgttgcagaggaaatcgctgaagtcactaaaaaaactgaagaaaaagaaattgaagtg ctaacaaaattaaaggacactgttgacaaacaacgggaagacctacgcaaacataaacgggacatgaaacagaaaatcgt cgactgtgaagcacttcaagctcagcttgatcagatcgtgaaagttaacacagagttaaggcggaataacagtatacaac gtaaacaaaaccaccatctgatagaggagaaaagtgacctggaagccaaactagccgataaagagcaacaaatcacaaaa ataacagagttaatcgaggaacaggagaaaaagacggagaaagtcgagaatgttactgctgcttctaatgtgatgcaaag tctaccagaagatgaagtgcttcaagctcagctggatcagatcgtgaaagttaactcagagttaaggcggaataacagta tacaacgtaaacaaaaccaccatctgatagaggagaaaagtgacctggaagctagactagccgataaagagcaacaaatc acaaaaataaccgagttaatcgaggaacaggagaaaaagacagagaaagtcgaaaatgttactgctgcttctaatgtgat gcaaagtctacctgaagatgaagtggttggtagtgctataaattatgaggtagacgatgatcatgtgatagaatcagcag acccactacctcaatatcctccaggagctcctcaggggctcacaggagagcaaggagctcacagagaggaggagggtgaa aacatggctcatatcgagcagacacttagtactgtagggaaaatggttatagacatgaaggatcctaaccgaccacggtt tacaatgaacgaactgaggacggttatcatggagaggaatgaacttaaaaataaactacacgaagtagaggaggaactca cgacgtatcgcccaccagtgccaagaaaaaacacaacaaacagtgatgattatatgggggaggagcttccagtacaggga ccaatcaacagggagcctgaggacaaactgtttccacggagacgtgaatcaggcatccgtaaattgtttgaaagatga |
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| Transcript ID | pfu_aug2.0_426.1_20756.t2 |
| Definition | - |
>pfu_aug2.0_426.1_20756.t2 atggatccgtacaaagaaaggcgcgatatcatggacgaagacttactagaggttgtgtcagtggttgatgtgtacgatca agcagcagagattgggaaagagtttgaaaaactgatagagggacatggagttgaggcagtaacggatttgatgccaaaag tgataaaatctttagaacaattagagcttctggccagcaagtatgaaaaagaaagtagtgaaataaatgaacttcgttca atgatagagaaacttgagacagaaaagaatgaacgagctcaagaaaggttgcgttatgaggaggaacttttacaaataga ggagaactggcagagggaaacacgggagttggtgaaatcggtgagtcgattacaggatgagaaccagaaactacgggcaa acttagtggacaccaaggaagctgttgcagaggaaatcgctgaagtcactaaaaaaactgaagaaaaagaaattgaagtg ctaacaaaattaaaggacactgttgacaaacaacgggaagacctacgcaaacataaacgggacatgaaacagaaaatcgt cgactgtgaagcacttcaagctcagcttgatcagatcgtgaaagttaacacagagttaaggcggaataacagtatacaac gtaaacaaaaccaccatctgatagaggagaaaagtgacctggaagccaaactagccgataaagagcaacaaatcacaaaa ataacagagttaatcgaggaacaggagaaaaagacggagaaagtcgagaatgttactgctgcttctaatgtgatgcaaag tctaccagaagatgaagtgcttcaagctcagctggatcagatcgtgaaagttaactcagagttaaggcggaataacagta tacaacgtaaacaaaaccaccatctgatagaggagaaaagtgacctggaagctagactagccgataaagagcaacaaatc acaaaaataaccgagttaatcgaggaacaggagaaaaagacagagaaagtcgaaaatgttactgctgcttctaatgtgat gcaaagtctacctgaagatgaagtggttggtagtgctataaattatgaggtagacgatgatcatgtgatagaatcagcag acccactacctcaatatcctccaggagctcctcaggggctcacaggagagcaaggagctcacagagaggaggagggtgaa aacatggctcatatcgagcagacacttagtactgtagggaaaatggttatagacatgaaggatcctaaccgaccacggtt tacaatgaacgaactgaggacggttatcatggagaggaatgaacttaaaaataaactacacgaagtagaggaggaactca cgacgtatcgcccaccgtaa |
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Protein
| Protein ID | pfu_aug2.0_426.1_20756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20756.t1 MDPYKERRDIMDEDLLEVVSVVDVYDQAAEIGKEFEKLIEGHGVEAVTDLMPKVIKSLEQLELLASKYEKESSEINELRS MIEKLETEKNERAQERLRYEEELLQIEENWQRETRELVKSVSRLQDENQKLRANLVDTKEAVAEEIAEVTKKTEEKEIEV LTKLKDTVDKQREDLRKHKRDMKQKIVDCEALQAQLDQIVKVNTELRRNNSIQRKQNHHLIEEKSDLEAKLADKEQQITK ITELIEEQEKKTEKVENVTAASNVMQSLPEDEVLQAQLDQIVKVNSELRRNNSIQRKQNHHLIEEKSDLEARLADKEQQI TKITELIEEQEKKTEKVENVTAASNVMQSLPEDEVVGSAINYEVDDDHVIESADPLPQYPPGAPQGLTGEQGAHREEEGE NMAHIEQTLSTVGKMVIDMKDPNRPRFTMNELRTVIMERNELKNKLHEVEEELTTYRPPVPRKNTTNSDDYMGEELPVQG PINREPEDKLFPRRRESGIRKLFER |
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| Protein ID | pfu_aug2.0_426.1_20756.t2 |
| Definition | - |
>pfu_aug2.0_426.1_20756.t2 MDPYKERRDIMDEDLLEVVSVVDVYDQAAEIGKEFEKLIEGHGVEAVTDLMPKVIKSLEQLELLASKYEKESSEINELRS MIEKLETEKNERAQERLRYEEELLQIEENWQRETRELVKSVSRLQDENQKLRANLVDTKEAVAEEIAEVTKKTEEKEIEV LTKLKDTVDKQREDLRKHKRDMKQKIVDCEALQAQLDQIVKVNTELRRNNSIQRKQNHHLIEEKSDLEAKLADKEQQITK ITELIEEQEKKTEKVENVTAASNVMQSLPEDEVLQAQLDQIVKVNSELRRNNSIQRKQNHHLIEEKSDLEARLADKEQQI TKITELIEEQEKKTEKVENVTAASNVMQSLPEDEVVGSAINYEVDDDHVIESADPLPQYPPGAPQGLTGEQGAHREEEGE NMAHIEQTLSTVGKMVIDMKDPNRPRFTMNELRTVIMERNELKNKLHEVEEELTTYRPP |
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