Gene
| Gene Model ID | pfu_aug2.0_426.1_20758 |
|---|---|
| Locus | scaffold426.1 : 132288 ... 138595 : - |
| To GenomeBrowser | scaffold426.1:132288..138595 |
| Genes list of scaffold | scaffold426.1 |
| Synonym | pfu_aug1.0_4452.1_23578 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_426.1_20758.t2 | 8 | 1 | LRR_7 | 24 | 33 | 1.4e-09 | 36.5 | 4.7 | 14000.0 | -2.7 |
| pfu_aug2.0_426.1_20758.t2 | 4 | 1 | LRR_8 | 43 | 85 | 7.3e-18 | 64.0 | 2.8e-06 | 0.0082 | 15.8 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 1 | LRR_4 | 50 | 90 | 9.4e-28 | 95.3 | 2.2e-09 | 6.5e-06 | 25.6 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 1 | LRR_1 | 51 | 72 | 1.9e-11 | 42.3 | 0.042 | 120.0 | 3.2 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 2 | LRR_7 | 51 | 65 | 1.4e-09 | 36.5 | 0.25 | 740.0 | 1.2 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 2 | LRR_4 | 74 | 112 | 9.4e-28 | 95.3 | 6.2e-15 | 1.8e-11 | 43.3 |
| pfu_aug2.0_426.1_20758.t2 | 4 | 2 | LRR_8 | 74 | 131 | 7.3e-18 | 64.0 | 5.0e-13 | 1.5e-09 | 37.4 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 2 | LRR_1 | 74 | 95 | 1.9e-11 | 42.3 | 0.00015 | 0.44 | 10.7 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 3 | LRR_7 | 74 | 89 | 1.4e-09 | 36.5 | 6.4e-05 | 0.19 | 12.0 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 3 | LRR_4 | 97 | 138 | 9.4e-28 | 95.3 | 7.7e-11 | 2.3e-07 | 30.2 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 3 | LRR_1 | 97 | 118 | 1.9e-11 | 42.3 | 2.2e-06 | 0.0064 | 16.3 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 4 | LRR_7 | 97 | 112 | 1.4e-09 | 36.5 | 2.2e-06 | 0.0065 | 16.4 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 4 | LRR_1 | 121 | 136 | 1.9e-11 | 42.3 | 0.5 | 1500.0 | 0.0 |
| pfu_aug2.0_426.1_20758.t2 | 4 | 3 | LRR_8 | 129 | 178 | 7.3e-18 | 64.0 | 0.00021 | 0.63 | 9.8 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 4 | LRR_4 | 143 | 183 | 9.4e-28 | 95.3 | 1.4e-06 | 0.004 | 16.7 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 5 | LRR_1 | 143 | 160 | 1.9e-11 | 42.3 | 0.0011 | 3.4 | 8.0 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 5 | LRR_7 | 143 | 157 | 1.4e-09 | 36.5 | 0.01 | 30.0 | 5.4 |
| pfu_aug2.0_426.1_20758.t2 | 4 | 4 | LRR_8 | 167 | 224 | 7.3e-18 | 64.0 | 1.7e-09 | 5.1e-06 | 26.1 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 6 | LRR_1 | 171 | 186 | 1.9e-11 | 42.3 | 0.74 | 2200.0 | -0.5 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 5 | LRR_4 | 173 | 204 | 9.4e-28 | 95.3 | 1.7e-07 | 0.00051 | 19.5 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 6 | LRR_7 | 173 | 179 | 1.4e-09 | 36.5 | 5.0 | 15000.0 | -3.3 |
| pfu_aug2.0_426.1_20758.t2 | 6 | 6 | LRR_4 | 189 | 226 | 9.4e-28 | 95.3 | 1.1e-09 | 3.3e-06 | 26.5 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 7 | LRR_7 | 189 | 205 | 1.4e-09 | 36.5 | 0.05 | 150.0 | 3.3 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 7 | LRR_1 | 190 | 210 | 1.9e-11 | 42.3 | 0.006 | 18.0 | 5.8 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 8 | LRR_7 | 212 | 225 | 1.4e-09 | 36.5 | 0.0052 | 16.0 | 6.2 |
| pfu_aug2.0_426.1_20758.t2 | 8 | 8 | LRR_1 | 213 | 226 | 1.9e-11 | 42.3 | 0.0035 | 10.0 | 6.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_426.1_20758.t2 | gi|383860606|ref|XP_003705780.1| | PREDICTED: leucine-rich repeat-containing protein 47-like [Megachile rotundata] | 0.0 |
| pfu_aug2.0_426.1_20758.t2 | gi|675890246|ref|XP_009030625.1| | hypothetical protein HELRODRAFT_165911 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_426.1_20758.t2 | gi|380013257|ref|XP_003690681.1| | 0.0 | |
| pfu_aug2.0_426.1_20758.t2 | gi|572264742|ref|XP_006610532.1| | PREDICTED: leucine-rich repeat-containing protein 47-like [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_426.1_20758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20758.t1 atgtcggttcgtcaatacattgtgtgttgtgttgtcaagcagattgatctaaccaaaacacagaactcattcaagaactt catcactttacagacaaagctgcatgatacaacatgtgttaaaagaaaagttgcaacgattgccacccatgatttgaagt tggtgaaacacccccttacttatgatgcaaagttccctcagcttctcctgattaaaccattatctaagaacaaagaggtc agtggtgaaaggttggtgagaaacttgatgaaggaggcagaggatttcagaaaggagaagaagagaaatacactatctgg aatacaccaatacctagagctactgagggacaagacacagtacccctgtctgatggacaaggagggcgtggttatttctt tcccacccataacaaacagtgatgttaccaaggtgatggacgaattgttaatccgaatgatggagatggacctgggtgcc gtacacagtaaaagcaaagatagcagtgatgaggaggaagaaacctctgaggccgctgccatggcaacacgtacacaaaa gaaactagtggtggagcaggtcaaggtcactgatatggaaggaaatctgagggttatatatcccagccgcactgaccttg taacctctgacatcaaggtcatcagacactttgattga |
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| Transcript ID | pfu_aug2.0_426.1_20758.t2 |
| Definition | - |
>pfu_aug2.0_426.1_20758.t2 atgacattgacaaaagtgaaaatggagaactcgtgggaagagatcagcacagcggcagctgaaaacagacgagaattgac actccatggagcagaaataagtaaaagaatagaaaatgaaggtctagatgaatcaatctacagtttaaaatcgttgaatt tccttgacatttctaaaacatgtctacgagaattgacatctggaatagggaatttagccaatttgacagatctggtattg cacaacaatgagttagaatccataccaccagagataggaggacttcagaagttaaaattccttgatatttcaaacaataa acttacttctttaccagatacaataccaaatctgtctgccttgcagtcattcaatgctagtatgaacaaactgaaggcaa tgccgtctgtagagaaacttctaatgctccatattctgaacattgcgcataatgagcttgaaagccttcctgatggaatc tacaatgcagaacttgttcacttgagtcagattgtcgcaaataataactcgatatctgaatttgaagcagagatttctga cttgccccatctaaatttgctgaacctggaatcaaattgtttgacctctgtaccattagaactcagtgaatgtcctaaac tgaaggagttaaatctgaagggaaataaattcaaggacagaagatttggcaaacttgttgaacaatgtccaacgaaatct atgcttgattaccttgcaactttactcagaaaagaaaatgcagattcaaaaggaaaaccaaaaattgatctaaccaaaac acagaactcattcaagaacttcatcactttacagacaaagctgcatgatacaacatgtgttaaaagaaaagttgcaacga ttgccacccatgatttgaagttggtgaaacacccccttacttatgatgcaaagttccctcagcttctcctgattaaacca ttatctaagaacaaagaggtcagtggtgaaaggttggtgatggacgaattgttaatccgaatgatggagatggacctggg tgccgtacacagtaaaagcaaagatagcagtgatgaggaggaagaaacctctgaggccgctgccatggcaacacgtacac aaaagaaactagtggtggagcaggtcaaggtcactgatatggaaggaaatctgagggttatatatcccagccgcactgac cttgtaacctctgacatcaaggtcatcagacactttgattga |
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Protein
| Protein ID | pfu_aug2.0_426.1_20758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20758.t1 MSVRQYIVCCVVKQIDLTKTQNSFKNFITLQTKLHDTTCVKRKVATIATHDLKLVKHPLTYDAKFPQLLLIKPLSKNKEV SGERLVRNLMKEAEDFRKEKKRNTLSGIHQYLELLRDKTQYPCLMDKEGVVISFPPITNSDVTKVMDELLIRMMEMDLGA VHSKSKDSSDEEEETSEAAAMATRTQKKLVVEQVKVTDMEGNLRVIYPSRTDLVTSDIKVIRHFD |
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| Protein ID | pfu_aug2.0_426.1_20758.t2 |
| Definition | - |
>pfu_aug2.0_426.1_20758.t2 MTLTKVKMENSWEEISTAAAENRRELTLHGAEISKRIENEGLDESIYSLKSLNFLDISKTCLRELTSGIGNLANLTDLVL HNNELESIPPEIGGLQKLKFLDISNNKLTSLPDTIPNLSALQSFNASMNKLKAMPSVEKLLMLHILNIAHNELESLPDGI YNAELVHLSQIVANNNSISEFEAEISDLPHLNLLNLESNCLTSVPLELSECPKLKELNLKGNKFKDRRFGKLVEQCPTKS MLDYLATLLRKENADSKGKPKIDLTKTQNSFKNFITLQTKLHDTTCVKRKVATIATHDLKLVKHPLTYDAKFPQLLLIKP LSKNKEVSGERLVMDELLIRMMEMDLGAVHSKSKDSSDEEEETSEAAAMATRTQKKLVVEQVKVTDMEGNLRVIYPSRTD LVTSDIKVIRHFD |
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