Gene
| Gene Model ID | pfu_aug2.0_426.1_20760 |
|---|---|
| Locus | scaffold426.1 : 188676 ... 216569 : + |
| To GenomeBrowser | scaffold426.1:188676..216569 |
| Genes list of scaffold | scaffold426.1 |
| Synonym | pfu_aug1.0_21971.1_40330 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanylate cyclase soluble subunit beta-2-like | GO:0000166 GO:0007596 GO:0009190 GO:0016849 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_426.1_20760.t1 | 3 | 1 | HNOBA | 60 | 86 | 4.9e-08 | 32.4 | 0.0023 | 17.0 | 4.5 |
| pfu_aug2.0_426.1_20760.t1 | 3 | 2 | HNOBA | 102 | 139 | 4.9e-08 | 32.4 | 6.7e-12 | 4.9e-08 | 32.4 |
| pfu_aug2.0_426.1_20760.t1 | 1 | 1 | Guanylate_cyc | 145 | 258 | 2.3e-34 | 118.3 | 5.2e-38 | 3.8e-34 | 117.6 |
| pfu_aug2.0_426.1_20760.t1 | 3 | 3 | HNOBA | 502 | 502 | 4.9e-08 | 32.4 | 1.6 | 12000.0 | -4.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_426.1_20760.t1 | gi|530586834|ref|XP_005287168.1| | PREDICTED: guanylate cyclase soluble subunit beta-2-like [Chrysemys picta bellii] | 5.00264e-43 |
| pfu_aug2.0_426.1_20760.t1 | gi|8081019|gb|AAD09440.2| | 7.00649e-43 |
Transcript
| Transcript ID | pfu_aug2.0_426.1_20760.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20760.t1 atgttgtttcactgctatgaagatgaaaaaacgatgaagatgtttgaaatagcagctaacattgtaggtcttttgaaaga gagtgcgcagcagctgttcaaaacggagatatttttgactgtggtggacacaaacggaccaatcacagatgaaagataca ttgaccacgtgatcgcagagttggtcgagcctaaaatagacttttcctatgacaaaatgataaaatccaaaatcaattct ttttatctgaagtttgttctgtctggaagagatgacgatggttatcaggatgaaaaagaaagagctattgttctcaaagc caagctacagaaactggccatatcactggaggaggagaagaagaagacggacagtctattataccaaatgttaccttata aagtggctaatcaactcagggatggcaagcctgtagaggcagagaatcatgaagctgtgacgatactgttcagtgacata gtaagtttcaccatgatggcgtccaagacggaaccaatgggaacggtcaatgttcttaaccagctgttccataagtttga cacactttccattagacacggtgtctacaaagttgagacaatcggagatgcttacatggtcgtgtctggtgtaccggaag tggacgaagagcatgcccagaaactgtcaaatatggctgtggacatgatggaagaaagtagaacagttctcaatccgtat acaaaatgtcctttacagatacggatagggctgcacagtggtccagttgtaacagattcagaatatccaacattaagtca agatgaatcaaatacacttgagggtcctatacaaagtgaagaagcatcatttgtgctacgccgaatgcagaaaaataaga gtcccggcagtgatggcttttcatcagaattctttcagaatagacgaccgcagcaagagatacagaagggacaagaaaca ccaaaagcagaaaagatgaccgcaggaacagatgcagaagggacaaataaaaccaaagaaaggaggggatctccagcaac actaggttgcagcaacccacagcaaaatcccaaagcacccatgcaaaaaacccagaacagacacacacagaaagagacgc aaaagggaccaggaacatacagaatagacaaccgcagaagagatatagaagggacaaagaacaccaaaacacagaataga cgaccacagcaagagatgcaaaagggacaaggaacacctaaacacagtatagacgaccacagcaagagatgtataagagc atggaacatcaaacgcagcagaagatgcagaagggacaaggaacatcgaagacagaatagacagaatagacgaccgcagc aagagatgcagacggaacaaggaacaccaaaaacaaaatggaccaccacaggagcagaagtaaaagggacgaggaacacc aaaacacagaatagacgaccacagcaagagatgcagaagggacaaggaacaccaaaacacagaatagacgaccacagcaa gagatgtataagagcatggaacatcaaacacagaatagacgaccaaagcaagagatttagaagagacaatgaacaccaaa acacagaacagacgaccaccgcaggaacagaagtaaaagggacgatgaacaccaaaaacagaatagaggacgcagcatga |
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Protein
| Protein ID | pfu_aug2.0_426.1_20760.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20760.t1 MLFHCYEDEKTMKMFEIAANIVGLLKESAQQLFKTEIFLTVVDTNGPITDERYIDHVIAELVEPKIDFSYDKMIKSKINS FYLKFVLSGRDDDGYQDEKERAIVLKAKLQKLAISLEEEKKKTDSLLYQMLPYKVANQLRDGKPVEAENHEAVTILFSDI VSFTMMASKTEPMGTVNVLNQLFHKFDTLSIRHGVYKVETIGDAYMVVSGVPEVDEEHAQKLSNMAVDMMEESRTVLNPY TKCPLQIRIGLHSGPVVTDSEYPTLSQDESNTLEGPIQSEEASFVLRRMQKNKSPGSDGFSSEFFQNRRPQQEIQKGQET PKAEKMTAGTDAEGTNKTKERRGSPATLGCSNPQQNPKAPMQKTQNRHTQKETQKGPGTYRIDNRRRDIEGTKNTKTQNR RPQQEMQKGQGTPKHSIDDHSKRCIRAWNIKRSRRCRRDKEHRRQNRQNRRPQQEMQTEQGTPKTKWTTTGAEVKGTRNT KTQNRRPQQEMQKGQGTPKHRIDDHSKRCIRAWNIKHRIDDQSKRFRRDNEHQNTEQTTTAGTEVKGTMNTKNRIEDAA |
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