Gene
| Gene Model ID | pfu_aug2.0_426.1_20763 |
|---|---|
| Locus | scaffold426.1 : 272296 ... 291526 : + |
| To GenomeBrowser | scaffold426.1:272296..291526 |
| Genes list of scaffold | scaffold426.1 |
| Synonym | pfu_aug1.0_18968.1_18594 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peptidyl-prolyl cis-trans isomerase fkbp6-like | GO:0044267 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_426.1_20763.t1 | 1 | 1 | FKBP_C | 95 | 182 | 2.0e-20 | 72.5 | 3.0e-23 | 4.9e-20 | 71.3 |
| pfu_aug2.0_426.1_20763.t1 | 2 | 1 | TPR_11 | 216 | 292 | 6.4e-07 | 28.9 | 6.8e-07 | 0.0011 | 18.5 |
| pfu_aug2.0_426.1_20763.t1 | 2 | 1 | Apc3 | 223 | 245 | 5.6e-06 | 26.3 | 0.2 | 330.0 | 1.4 |
| pfu_aug2.0_426.1_20763.t1 | 3 | 1 | TPR_12 | 231 | 293 | 3.5e-07 | 30.0 | 6.4e-06 | 0.01 | 15.7 |
| pfu_aug2.0_426.1_20763.t1 | 2 | 2 | Apc3 | 235 | 321 | 5.6e-06 | 26.3 | 4.1e-09 | 6.8e-06 | 26.1 |
| pfu_aug2.0_426.1_20763.t1 | 3 | 2 | TPR_12 | 262 | 325 | 3.5e-07 | 30.0 | 3.7e-08 | 6.0e-05 | 22.8 |
| pfu_aug2.0_426.1_20763.t1 | 2 | 2 | TPR_11 | 264 | 327 | 6.4e-07 | 28.9 | 1.0e-07 | 0.00017 | 21.1 |
| pfu_aug2.0_426.1_20763.t1 | 3 | 3 | TPR_12 | 298 | 335 | 3.5e-07 | 30.0 | 0.00069 | 1.1 | 9.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_426.1_20763.t1 | gi|524864689|ref|XP_005089179.1| | PREDICTED: 70 kDa peptidyl-prolyl isomerase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_426.1_20763.t1 | gi|221119074|ref|XP_002167164.1| | PREDICTED: inactive peptidyl-prolyl cis-trans isomerase FKBP6-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_426.1_20763.t1 | gi|198437628|ref|XP_002128893.1| | PREDICTED: inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_426.1_20763.t1 | gi|156392807|ref|XP_001636239.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_426.1_20763.t1 | gi|699238739|ref|XP_009857551.1| | PREDICTED: inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X2 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_426.1_20763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20763.t1 atgaccccactgacagagcctcttgaggtacataaatgtaaagatggagtgatgtttgaaacggaggaactagatgtaca ggatgaagaggagaaagcttacttcaaacctgaagacgtgctacagaatctatatatagatgacgatgaggacacagacg atgatgatgacgatgtgctgccgttcacaaagatgaggaagaaaatggaggatattactcccaataaagacggaggcgtc cataaaaagatcctacaggaaggctcgggtaacgtcataccaccgggatgtatcattaccattcactttaacggttattt ggagctgacagatgagccgtttgactcgtccaggttgaggaacagcccccacaagtgtagactggagggaggtggcctga tccctgggttagagctggcagtatccacaatgaagaaaggagagctggccagggtattaatagaagccgagtacgcttac ggcaaactggggattccccctcgaatacctgaggatgctacagtgatgtttgaggtagagttactggactttgtagaaca tgctggtttagatgactatcacctaatgacagagcaagaaaaaagagatgtgtcattccaaaatattgtcaagcattatg aacagtgtaaacaagaaggtaaacagtactggaacagtgcccaatacagcaaagcattccaaaaatacaaaaaggcagcc atgtacctggaggattgtcacttggctaatgaggaggaagagacacaacagcaggcaggactcctcaaactatatcagaa catggccatgtgttgtgctaggatgaacgaatggagaaggtgtatctcctggtctaatagagctctgaacatggacaaaa acaacatcaaaagtctgtataacctaggcaagtctctgcacagaatcagtgagtttcatagggctagagatgtattatta cgtgcacggagaatggagcccaataacggtagtatcaacaaggaactggctgatctggaaaagtcagtgaagcagcacaa gttaatagagagggaaatgtactccaagatgttccctaaggccggtatacaaacagaagaggatagaaagaggatggctc agctggatgcagttaaccaagctaaagaagatacggcaatgtcatgtacaccagagttcaagagacaagtacagactcaa ttaaaagaatttaacgaagatgatgatcagacagaatggccgttccccaaattgaacctaacaatcggagaaatcgagac aattttagaaactgcccaagacttagggcttgaattcaaagaagtcggcagtggacaaaacttaaaaatcaaagtttaca aaaagaagaagaacggttaa |
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Protein
| Protein ID | pfu_aug2.0_426.1_20763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_426.1_20763.t1 MTPLTEPLEVHKCKDGVMFETEELDVQDEEEKAYFKPEDVLQNLYIDDDEDTDDDDDDVLPFTKMRKKMEDITPNKDGGV HKKILQEGSGNVIPPGCIITIHFNGYLELTDEPFDSSRLRNSPHKCRLEGGGLIPGLELAVSTMKKGELARVLIEAEYAY GKLGIPPRIPEDATVMFEVELLDFVEHAGLDDYHLMTEQEKRDVSFQNIVKHYEQCKQEGKQYWNSAQYSKAFQKYKKAA MYLEDCHLANEEEETQQQAGLLKLYQNMAMCCARMNEWRRCISWSNRALNMDKNNIKSLYNLGKSLHRISEFHRARDVLL RARRMEPNNGSINKELADLEKSVKQHKLIEREMYSKMFPKAGIQTEEDRKRMAQLDAVNQAKEDTAMSCTPEFKRQVQTQ LKEFNEDDDQTEWPFPKLNLTIGEIETILETAQDLGLEFKEVGSGQNLKIKVYKKKKNG |
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