Gene
| Gene Model ID | pfu_aug2.0_4260.1_02595 |
|---|---|
| Locus | scaffold4260.1 : 35216 ... 44432 : + |
| To GenomeBrowser | scaffold4260.1:35216..44432 |
| Genes list of scaffold | scaffold4260.1 |
| Synonym | pfu_aug1.0_107168.1_35297 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4260.1_02595.t1 | 1 | 1 | PhyH | 25 | 176 | 2.8e-34 | 119.0 | 4.7e-38 | 3.5e-34 | 118.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4260.1_02595.t1 | gi|524871031|ref|XP_005092292.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4260.1_02595.t1 | gi|585659957|ref|XP_006816290.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_4260.1_02595.t1 | gi|548427323|ref|XP_005743411.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_4260.1_02595.t1 | gi|499036459|ref|XP_004568893.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal [Maylandia zebra] | 0.0 |
| pfu_aug2.0_4260.1_02595.t1 | gi|585686190|ref|XP_006820280.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4260.1_02595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4260.1_02595.t1 atgagagatgtagccatcaaagattcggagtatgttccaggacaacaagctgtgaccaaaatccagaactttcaactaga cgatgtactattcgaatactgcaaacatcctcaggttgtgaaatatgtcgaggcttttgtgggacctaacattaatgctg tacataccatgttgatcaacaaaccacctgaccctggtaagaagtcatcccgacacccattgcaccaggatttgcattat tttcccttccggccagcagacagaatcgtctgttcttggacagcaatgcaaaccgtcaacagagctaatggctgtctagt ggtacagccgggaactcataaaggcaacctgctagaacatggctaccctcagtgggagggtggtgtaaatcacttgtatc acgggataatgcagtttgatcctgacgcccctcgacatcacttggagatggaagccggggacaccgtctttttccatcct ctactgattcacgggtctggaatgaacaaaactaacgacttcaggaaatcaatatcctgtcattacgccagtgctgactg ttactttgtggacattaccgggacgatacaagaagctgctgttgacgaggtctatgagatggcaatcaaaaagggagcaa agacagagcaattagatattactaaaatgtggaaactgaagagtaggctcgtaaaaggtgtgtcagactggaaataa |
|
Protein
| Protein ID | pfu_aug2.0_4260.1_02595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4260.1_02595.t1 MRDVAIKDSEYVPGQQAVTKIQNFQLDDVLFEYCKHPQVVKYVEAFVGPNINAVHTMLINKPPDPGKKSSRHPLHQDLHY FPFRPADRIVCSWTAMQTVNRANGCLVVQPGTHKGNLLEHGYPQWEGGVNHLYHGIMQFDPDAPRHHLEMEAGDTVFFHP LLIHGSGMNKTNDFRKSISCHYASADCYFVDITGTIQEAAVDEVYEMAIKKGAKTEQLDITKMWKLKSRLVKGVSDWK |
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