Gene
| Gene Model ID | pfu_aug2.0_427.1_24016 |
|---|---|
| Locus | scaffold427.1 : 203606 ... 212094 : + |
| To GenomeBrowser | scaffold427.1:203606..212094 |
| Genes list of scaffold | scaffold427.1 |
| Synonym | pfu_aug1.0_197.1_22061 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_427.1_24016.t1 | 1 | 1 | Tetraspannin | 18 | 275 | 5.6e-27 | 94.4 | 1.1e-30 | 8.4e-27 | 93.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_427.1_24016.t1 | gi|676483679|ref|XP_009063102.1| | hypothetical protein LOTGIDRAFT_235513 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_427.1_24016.t1 | gi|291230532|ref|XP_002735210.1| | PREDICTED: photoreceptor outer segment membrane glycoprotein 2-like [Saccoglossus kowalevskii] | 9.80909e-45 |
| pfu_aug2.0_427.1_24016.t1 | gi|115709906|ref|XP_001197913.1| | PREDICTED: peripherin-2-like [Strongylocentrotus purpuratus] | 1.00053e-42 |
| pfu_aug2.0_427.1_24016.t1 | gi|557025172|ref|XP_006012749.1| | PREDICTED: photoreceptor outer segment membrane glycoprotein 2-like [Latimeria chalumnae] | 7.00005e-41 |
| pfu_aug2.0_427.1_24016.t1 | gi|742134148|ref|XP_010877179.1| | PREDICTED: photoreceptor outer segment membrane glycoprotein 2-like [Esox lucius] | 8.00001e-41 |
Transcript
| Transcript ID | pfu_aug2.0_427.1_24016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24016.t1 atgtgtttaacaatacgaatttctgagtctgggaggcaaaaactaggtctgactgtagctgttctgaatggactattgtc gctaaccggtctagccctgattgggattggggcttatatgaacattcatctagaatcaaaaatggcgcttatggaaggct atgattcaggaacgttgccttactttctcatcacgctaggtctgttaatgtttgttttagatggtttatttgcgaaagcc ggatacgattgtgcatacccagaatccagatctagatttcagaatttgttaattctgttcattttgatgaaattcgttct gatatgggtgattctggctggatccattatgtcttttacccatcaagctgttatacgagagtccttcaggaatggtttaa cagccatcatgaaaaggtacaaaacggacaaatcagctaaaatgatgatggatcaagtacagattagttataaatgctgc gggagtaacatctatcttgattggctaacaacgaactggatcaatgaagagtttctggatacaaaatcatcagcaatcaa aaggaaaatgagaaatggtttatactacagcgatgatgtaccattcagttgctgtgacccggaagtacaacgcccgtgtg tacaccatgatatccggaacaaagctgcgcatatcaactacggcgcaatcacgttacacaaacagggctgtgctgcaaag ctgatgttctttattgagtacgctgttttatctcccactgcgtacaccgtcttgatagctttctttgtacagatgataac ctgtatattactaagatacttacaaacatcgatcatgaacgcttgcctgatgaagcctcttggaccaggggcaggctacg ttatcccagaatgcccctgtgatctgtgtaaaacaggagatccaatcaaatataccaaagagggacgatatgaagaagac gccgatactggtgcaggaggaggcggaggaggagggggagattttagcaacttcggaggaggtggaggaggaggaggcgg cggaaacagggaggatgggagtgatggaggaggcgatgggtttgacggagtaggtaaaggaaaagacaaaggagaaaaac aaaagggagagaaggattcgaaaaaaagagaaaaagaaggaaaaaacaaaactaaggatggcgattctaagaagaataag aataaagataaagctacaaaatctccagataaatcgaaaaaatctgcgtcaccaccaaaacagaaaccaaaagccaaatc aaaatctccaccgaaaacaaaagcgaaagcgaaaccaagatcacccaaatcccctaagaaaaaagctttcaaatccccga agaaaactaaagctccgaaagcatcgccaaggaggagatcgcctagaagacgataa |
|
Protein
| Protein ID | pfu_aug2.0_427.1_24016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24016.t1 MCLTIRISESGRQKLGLTVAVLNGLLSLTGLALIGIGAYMNIHLESKMALMEGYDSGTLPYFLITLGLLMFVLDGLFAKA GYDCAYPESRSRFQNLLILFILMKFVLIWVILAGSIMSFTHQAVIRESFRNGLTAIMKRYKTDKSAKMMMDQVQISYKCC GSNIYLDWLTTNWINEEFLDTKSSAIKRKMRNGLYYSDDVPFSCCDPEVQRPCVHHDIRNKAAHINYGAITLHKQGCAAK LMFFIEYAVLSPTAYTVLIAFFVQMITCILLRYLQTSIMNACLMKPLGPGAGYVIPECPCDLCKTGDPIKYTKEGRYEED ADTGAGGGGGGGGDFSNFGGGGGGGGGGNREDGSDGGGDGFDGVGKGKDKGEKQKGEKDSKKREKEGKNKTKDGDSKKNK NKDKATKSPDKSKKSASPPKQKPKAKSKSPPKTKAKAKPRSPKSPKKKAFKSPKKTKAPKASPRRRSPRRR |
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