Gene
| Gene Model ID | pfu_aug2.0_427.1_24017 |
|---|---|
| Locus | scaffold427.1 : 214152 ... 218875 : - |
| To GenomeBrowser | scaffold427.1:214152..218875 |
| Genes list of scaffold | scaffold427.1 |
| Synonym | pfu_aug1.0_87014.1_64003 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_427.1_24017.t1 | 3 | 1 | Cu-oxidase_3 | 44 | 148 | 1.0e-38 | 131.7 | 4.90006e-41 | 1.2e-37 | 128.2 |
| pfu_aug2.0_427.1_24017.t1 | 2 | 1 | Cu-oxidase_2 | 62 | 146 | 1.3e-31 | 108.9 | 0.00032 | 0.79 | 9.2 |
| pfu_aug2.0_427.1_24017.t1 | 3 | 1 | Cu-oxidase | 116 | 131 | 7.2e-31 | 107.2 | 3.5 | 8600.0 | -3.6 |
| pfu_aug2.0_427.1_24017.t1 | 3 | 2 | Cu-oxidase | 155 | 323 | 7.2e-31 | 107.2 | 5.5e-33 | 1.4e-29 | 103.0 |
| pfu_aug2.0_427.1_24017.t1 | 3 | 2 | Cu-oxidase_3 | 265 | 299 | 1.0e-38 | 131.7 | 0.42 | 1000.0 | -0.6 |
| pfu_aug2.0_427.1_24017.t1 | 3 | 3 | Cu-oxidase_3 | 380 | 396 | 1.0e-38 | 131.7 | 3.9 | 9700.0 | -3.8 |
| pfu_aug2.0_427.1_24017.t1 | 2 | 2 | Cu-oxidase_2 | 427 | 566 | 1.3e-31 | 108.9 | 4.5e-31 | 1.1e-27 | 96.2 |
| pfu_aug2.0_427.1_24017.t1 | 3 | 3 | Cu-oxidase | 439 | 479 | 7.2e-31 | 107.2 | 0.13 | 320.0 | 1.1 |
Transcript
| Transcript ID | pfu_aug2.0_427.1_24017.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24017.t1 atgcttcacccaactgagagtgcggtgtttccatcagacggtaaactctacagatatgacgtcacaaatacgtcagcagc cacaccgataaatgtatctgaagtaatcgttggtgacggattccaacatcaaaaactggtggttgtctttaatatgtcca tgccgggacctgatatcattgtatacgagggtcaaagactcgttgtgaccgtagtaaatcagctccattctgaagcagtc acggtccactggcacggacttccacagcgtgggtcgccatacatggatggtgttccctttgtcacacaatgtcctgtcaa tccaggtgcctccttcagatacgactttatagcaagaccaaagggatcatattggtatcattcacacgtgggcgggcaaa ggaccgagggggcctttggagcacttatcattcgtgacaatcaaccatcatattccctagaggagcacatcatacaagtt caagaatggagtcataaatacagctctaatttagcattgcaacaatttaagactgatgtcatcaatggagttaaagcgtc accccagagatactttgacggatcggaagcagatcttattgatgttgattctgccttaatcaatggaaaaggccgataca aatcgaatcagtcaaatgattacaactccactccactcgaggtgtataatgtcaaaatgggaagaaaatatcgcttcaga gttataggagtgggttcgatgtttccatttcgagtctctgttgacaaccataaactaacaatagtagctacagacggtca tgacgtcatacctatggagtatgattcatttatcatatatcccggagaaagatatgattttctattgaatgcctctcaca ctgcgtcaaattattggattcgtggtgagtctatacgagctcacgaggagcacatagtagcttgggcaatacttcgatat gatggtgctccagacgaggaaccaacatcgcactcacaaagagtaccttgtacaagttcatccaaatgttatattctgaa ctgcccaactttgaattatccactgggtgaaaatagtatttgtcatgacgtcacgaaattaaggttacttgatggtcacg atagcgttccagattttgtccaaggtcaatcgacggaatatcactttgcgttaagtcgatttagaggattattctacatt ataaatgccagacatttcgtgcatccagtagtttctgccatctcccagcccaacgctataactgctaaatgtgatgactg tatcggtaacggactttgccattgtacgcattctgtcactctaaaccatgacaatacagttcaaatgaccctgttctatg gtcatttagggagttcacttggtcatcctatgcatttacatggtcattctttttacgtggtgaagatggggtacgcaatg tataatgagacgactgcacaatacatttcagcctcggaagacaccgagtgcataggttttggatgtatgcgtctaaagtt ttcgaattcatcatggcagggtgatgatatccccggaattcagctcaataatccaccacgaaaagataccatcctggtgc ccagagggggttatgttgtcatccgtatcaaggccgataacccaggtttgtggatgatgcattgccatgccgttttacac tctcttgacaactttgcttttttgtttaacgaatcgttcaatcatttgccgagaaaacccgaaggcttcccagaatgtaa taacttcccgccaatacaagaatccacggttcccacaaattatgacagaactactgtttcctctacaaagagtgatgaaa gaagtacatctatggcaaagtcgcagaactacaaagaaactgaagacaatatagagacacggacgttctggatcgtagtt ggcttgttggtagccataattttattccagcttctgttcaacttcgccatccacaagaagatcacaaaatcctcagggaa taagagggaaattacctatattgcagatattgcttctgaaaatgggaaaactaataaaggatatctaacttaa |
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Protein
| Protein ID | pfu_aug2.0_427.1_24017.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24017.t1 MLHPTESAVFPSDGKLYRYDVTNTSAATPINVSEVIVGDGFQHQKLVVVFNMSMPGPDIIVYEGQRLVVTVVNQLHSEAV TVHWHGLPQRGSPYMDGVPFVTQCPVNPGASFRYDFIARPKGSYWYHSHVGGQRTEGAFGALIIRDNQPSYSLEEHIIQV QEWSHKYSSNLALQQFKTDVINGVKASPQRYFDGSEADLIDVDSALINGKGRYKSNQSNDYNSTPLEVYNVKMGRKYRFR VIGVGSMFPFRVSVDNHKLTIVATDGHDVIPMEYDSFIIYPGERYDFLLNASHTASNYWIRGESIRAHEEHIVAWAILRY DGAPDEEPTSHSQRVPCTSSSKCYILNCPTLNYPLGENSICHDVTKLRLLDGHDSVPDFVQGQSTEYHFALSRFRGLFYI INARHFVHPVVSAISQPNAITAKCDDCIGNGLCHCTHSVTLNHDNTVQMTLFYGHLGSSLGHPMHLHGHSFYVVKMGYAM YNETTAQYISASEDTECIGFGCMRLKFSNSSWQGDDIPGIQLNNPPRKDTILVPRGGYVVIRIKADNPGLWMMHCHAVLH SLDNFAFLFNESFNHLPRKPEGFPECNNFPPIQESTVPTNYDRTTVSSTKSDERSTSMAKSQNYKETEDNIETRTFWIVV GLLVAIILFQLLFNFAIHKKITKSSGNKREITYIADIASENGKTNKGYLT |
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