Gene
| Gene Model ID | pfu_aug2.0_427.1_24021 |
|---|---|
| Locus | scaffold427.1 : 298416 ... 318353 : + |
| To GenomeBrowser | scaffold427.1:298416..318353 |
| Genes list of scaffold | scaffold427.1 |
| Synonym | pfu_aug1.0_8589.1_60463 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_427.1_24021.t1 | 5 | 1 | TSP_1 | 25 | 41 | 3.3e-17 | 62.3 | 0.16 | 2400.0 | -1.3 |
| pfu_aug2.0_427.1_24021.t1 | 5 | 2 | TSP_1 | 52 | 106 | 3.3e-17 | 62.3 | 4.5e-11 | 6.6e-07 | 29.3 |
| pfu_aug2.0_427.1_24021.t1 | 5 | 3 | TSP_1 | 116 | 170 | 3.3e-17 | 62.3 | 8.4e-10 | 1.3e-05 | 25.2 |
| pfu_aug2.0_427.1_24021.t1 | 5 | 4 | TSP_1 | 177 | 234 | 3.3e-17 | 62.3 | 5.1e-10 | 7.5e-06 | 25.9 |
| pfu_aug2.0_427.1_24021.t1 | 5 | 5 | TSP_1 | 266 | 271 | 3.3e-17 | 62.3 | 1.0 | 15000.0 | -4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_427.1_24021.t1 | gi|530594339|ref|XP_005290755.1| | PREDICTED: hemicentin-1 [Chrysemys picta bellii] | 8.99998e-41 |
| pfu_aug2.0_427.1_24021.t1 | gi|558106272|ref|XP_006110932.1| | PREDICTED: hemicentin-1-like, partial [Pelodiscus sinensis] | 6.0e-40 |
| pfu_aug2.0_427.1_24021.t1 | gi|591363768|ref|XP_007056786.1| | PREDICTED: LOW QUALITY PROTEIN: hemicentin-1 [Chelonia mydas] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_427.1_24021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24021.t1 atgttcaaaaaatcagaacccgaaggcatacaatatcaggataaaacagaaaccaaagcaaacaaacaaaaacctccacc acatgaaaagaagcggactcccgatatgagagtgagaccatgtgcccaggttgacggacagtggacagcttggagtatct ggacacagtactcgacatgttcactaacatgtggaggtggctatcaaatgcgggataggtcacgtgattgtacggacccg cctcctcaaaatggcggacttccctgtcttggaaatgattacgaaacagagactcaagaatgtcagacccagccatgccc aattgatggaggttggaccatatggggaccatggtctagttacgacacgtgtaccaaaacatgcaacactggtagtcaga cctcaaacagagggcgaacttgcaccaatcctacaccacaacacaacggggctcaatgtacagggttagactcagatcaa aggacaagtgcatgtaataccaatgcatgtccaattgacggcgtttggtcagaatggacagcttgggctccggccacaac ttgtactaaaacatgcgactcaggcacacaggatcactctcggagtcgcacgtgtaccaatccagcgcctcaaaatggcg gcaccgactgcccaggtcaatatcaagcgtttgatacacgctggtgtaatcaacaagcttgtccaccaagctgtccggct gactatgaagagcatacaacggcttggatatgttttaaattttacactagtagtttcggacagtcatacagtcagaaatc tcagaagtgtgacgctgatgggggattcttggcgaaggtggacaatctccaaaaacacaatgcaattgtcgcacatctcc agacattaagccacaaccaattcgtggttatccagggccaatatgtcagtaacgtttacaaatatgacgacggtactcag cttccctataccaactgggatggcggtcaacctggcggtgaaccatatatttccgtcacatttcagcagggttataaatg gcatgatctgacgtcacagatttcaacagctgatttcatttgcgaagtaccaatgtag |
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Protein
| Protein ID | pfu_aug2.0_427.1_24021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_427.1_24021.t1 MFKKSEPEGIQYQDKTETKANKQKPPPHEKKRTPDMRVRPCAQVDGQWTAWSIWTQYSTCSLTCGGGYQMRDRSRDCTDP PPQNGGLPCLGNDYETETQECQTQPCPIDGGWTIWGPWSSYDTCTKTCNTGSQTSNRGRTCTNPTPQHNGAQCTGLDSDQ RTSACNTNACPIDGVWSEWTAWAPATTCTKTCDSGTQDHSRSRTCTNPAPQNGGTDCPGQYQAFDTRWCNQQACPPSCPA DYEEHTTAWICFKFYTSSFGQSYSQKSQKCDADGGFLAKVDNLQKHNAIVAHLQTLSHNQFVVIQGQYVSNVYKYDDGTQ LPYTNWDGGQPGGEPYISVTFQQGYKWHDLTSQISTADFICEVPM |
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