Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4278.1_29266
Locus scaffold4278.1 : 14687 ... 21235 : -
To GenomeBrowser scaffold4278.1:14687..21235
Genes list of scaffold scaffold4278.1
Synonym pfu_aug1.0_10345.1_39034

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4278.1_29266.t1 gi|524913130|ref|XP_005111398.1| PREDICTED: nucleolin-like isoform X1 [Aplysia californica] 3.99931e-42
pfu_aug2.0_4278.1_29266.t1 gi|524913132|ref|XP_005111399.1| PREDICTED: nucleolin-like isoform X2 [Aplysia californica] 3.0e-38
pfu_aug2.0_4278.1_29266.t1 gi|676486938|ref|XP_009064137.1| hypothetical protein LOTGIDRAFT_235897 [Lottia gigantea] 3.0e-32
pfu_aug2.0_4278.1_29266.t1 gi|260841443|ref|XP_002613925.1| hypothetical protein BRAFLDRAFT_98499 [Branchiostoma floridae] 5.0e-20
pfu_aug2.0_4278.1_29266.t1 gi|72126006|ref|XP_800484.1| PREDICTED: nucleolin [Strongylocentrotus purpuratus] 2.0e-15

Transcript
Transcript IDpfu_aug2.0_4278.1_29266.t1
Definition-
>pfu_aug2.0_4278.1_29266.t1
atggcaagtgctaagccaagtatgcctcgggatggtacaatgcaagttactgcaaaggagggtgtacagtacttggagtc
tgaaggcaagacaaaactgttagaaatgcagggtcttaaagagcctgaaaaggacgaaccaacattaaaaagagactcta
caatggctgctactgcaaaggaggcagatgtcctgctaggcgatgacaagccagatgaggatgctaagaccagaggtcaa
caggccaagattgaagaggtcaaggccgaaacagcatcaccaaagaaaccgaagatggctaaaggggtcaccatggtggg
aactgccaaggaagcagacaggattctgggggatgataagcctgatgttgatgccatgaccaggggacagcagaaaaaaa
ttgaggaaatctcgaagcagcctccagcatctcctgccaaaaaacctcgcatacagaaagacggcaccatggccgcaact
gccaagataaagatgcgagaatctcgcaaaatcgcgccccaaaatgatccctggatctaggaggccaaagctcatatttt
aggaaaagaaaaattaggtgacacaaggcagcaaacaaaagcaactaccggtaaacccagcacaatgaagaaaactagct
caatatcaaaagccatagaggaggctaaatgggttgtgcccgacatcaatgtcaacgaaggacggagaacaagatcgcaa
tcaaatccaaaacccggtatgaaacgtgcaggtacgatgcaagaaacggcaaaggccggtagagacttcttaaaacgttc
caagaagggaaagaaatccaaagaaattgttgaggaagaagaagaagaggaggatgaggaggcataa

Protein
Protein IDpfu_aug2.0_4278.1_29266.t1
Definition-
>pfu_aug2.0_4278.1_29266.t1
MASAKPSMPRDGTMQVTAKEGVQYLESEGKTKLLEMQGLKEPEKDEPTLKRDSTMAATAKEADVLLGDDKPDEDAKTRGQ
QAKIEEVKAETASPKKPKMAKGVTMVGTAKEADRILGDDKPDVDAMTRGQQKKIEEISKQPPASPAKKPRIQKDGTMAAT
AKIKMRESRKIAPQNDPWIXEAKAHILGKEKLGDTRQQTKATTGKPSTMKKTSSISKAIEEAKWVVPDINVNEGRRTRSQ
SNPKPGMKRAGTMQETAKAGRDFLKRSKKGKKSKEIVEEEEEEEDEEA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495