Gene
| Gene Model ID | pfu_aug2.0_429.1_30750 |
|---|---|
| Locus | scaffold429.1 : 127196 ... 148987 : + |
| To GenomeBrowser | scaffold429.1:127196..148987 |
| Genes list of scaffold | scaffold429.1 |
| Synonym | pfu_aug1.0_13143.1_39453 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_429.1_30750.t1 | 4 | 1 | fn3 | 106 | 193 | 2.2e-36 | 123.8 | 5.4e-06 | 0.027 | 14.6 |
| pfu_aug2.0_429.1_30750.t1 | 4 | 2 | fn3 | 200 | 281 | 2.2e-36 | 123.8 | 9.2e-17 | 4.5e-13 | 49.1 |
| pfu_aug2.0_429.1_30750.t1 | 4 | 3 | fn3 | 296 | 377 | 2.2e-36 | 123.8 | 2.5e-15 | 1.2e-11 | 44.5 |
| pfu_aug2.0_429.1_30750.t1 | 4 | 4 | fn3 | 411 | 477 | 2.2e-36 | 123.8 | 5.8e-06 | 0.029 | 14.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_429.1_30750.t1 | gi|442628459|ref|NP_001260596.1| | Leukocyte-antigen-related-like, isoform H [Drosophila melanogaster] | 6.0e-29 |
| pfu_aug2.0_429.1_30750.t1 | gi|442628461|ref|NP_001260597.1| | Leukocyte-antigen-related-like, isoform I [Drosophila melanogaster] | 7.0e-29 |
| pfu_aug2.0_429.1_30750.t1 | gi|442628457|ref|NP_001260595.1| | Leukocyte-antigen-related-like, isoform G [Drosophila melanogaster] | 8.0e-29 |
| pfu_aug2.0_429.1_30750.t1 | gi|386769894|ref|NP_001246094.1| | Leukocyte-antigen-related-like, isoform D [Drosophila melanogaster] | 9.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_429.1_30750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30750.t1 atggcccaagtggggacagccggtcaaaatacccaatggacatcggcagatttcgcaaatgttgataatcacttacaaaa aatccagttatacgccaagtctttacaggacattatgtatcaagaacgcatgaagctttatccatggatgccgaacgcga cggcgacttctataaatttaggcccggctgctgtcccagaagccatagatacccgactgacgaaaatcgagtttaaactt ggggatttactcacgaattactccccttgtccatcgagaggagccgtaggtcctcctgtatcgccacctggcccacctcc ccctagaaatgtaattatccaatctgaaacccttggcaacagctcttctatcgttgtatcatgggatcctccaaatatca tgggaccagatgttccggtggacaaactacaatacaaagtctatttcgtaccaattgacgaatatggacaacagactgcc gctcaggttgtattcagtatttgtgatgcttcccaanggaaaacggaaaggtccgagtatttgcgattgacagtgtttga tttatttatgtataaaatgtatatattattaataccctctgaaccggttaatctaagagtagagggaacaaaagcgaacg ccatagcaataagatggaatccgcctgcagtttctggatcactcactaactacacgatctacgttgcatcagagaacgga agtcagttccaattgtccgttttgcctagagtgaccaatacaattatgtatgacctcatagagggcactcgatacgtggt cagtgtcagcgcatactcggacaatggagagggccccaaaagcagtccgatagaggtcaaaacagacgtgtattatcctg atatgccccgtaatttcagagtgacttatgtcaacactacttccgttggtttggcatgggacccacctacacccaccgcc caagctggaattatccgcttttacagcataaactacactgacagtcgctacaccgagtttttcaacttcaaaacaccaga tgcaacagtaacgtctgctattataacaggactgcagccagctaccacatactacttccgtgcttttgcgcacaccggaa gacgggctggtgccggaagtgcagtcgttatgcaagatacagatatgacagctccaactgctccccgacaactgatagca gaatcagcgcgtttggacccgcctcccatggctcgactgcagtggttaccccccgagaagacgtacggacgtctaactaa ctactctatacactggggtgtgcggaatggggctacgagaaaggaacttatattggactctacactagagtggtattctg attatctagatgacgatacagtgcacgagtttcagctatttgctggtaacgaacttggttacggaccaccagctgtagtt accttttcaactccaaaacgagatgacgatacagtgcacgagtttcagctatttgctggtaacgaacttggttacggacc accagctgtagttaccttttcaactccaaaacgaggatttggcagacacaattgtaccaccaaacgtgaaagtagaacgt ag |
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Protein
| Protein ID | pfu_aug2.0_429.1_30750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30750.t1 MAQVGTAGQNTQWTSADFANVDNHLQKIQLYAKSLQDIMYQERMKLYPWMPNATATSINLGPAAVPEAIDTRLTKIEFKL GDLLTNYSPCPSRGAVGPPVSPPGPPPPRNVIIQSETLGNSSSIVVSWDPPNIMGPDVPVDKLQYKVYFVPIDEYGQQTA AQVVFSICDASQXKTERSEYLRLTVFDLFMYKMYILLIPSEPVNLRVEGTKANAIAIRWNPPAVSGSLTNYTIYVASENG SQFQLSVLPRVTNTIMYDLIEGTRYVVSVSAYSDNGEGPKSSPIEVKTDVYYPDMPRNFRVTYVNTTSVGLAWDPPTPTA QAGIIRFYSINYTDSRYTEFFNFKTPDATVTSAIITGLQPATTYYFRAFAHTGRRAGAGSAVVMQDTDMTAPTAPRQLIA ESARLDPPPMARLQWLPPEKTYGRLTNYSIHWGVRNGATRKELILDSTLEWYSDYLDDDTVHEFQLFAGNELGYGPPAVV TFSTPKRDDDTVHEFQLFAGNELGYGPPAVVTFSTPKRGFGRHNCTTKRESRT |
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