Gene
| Gene Model ID | pfu_aug2.0_4319.1_32654 |
|---|---|
| Locus | scaffold4319.1 : 9139 ... 35455 : - |
| To GenomeBrowser | scaffold4319.1:9139..35455 |
| Genes list of scaffold | scaffold4319.1 |
| Synonym | pfu_aug1.0_1485.1_07973 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4319.1_32654.t1 | 3 | 1 | DNA_methylase | 26 | 85 | 0.0 | 199.6 | 3.6 | 11000.0 | -4.9 |
| pfu_aug2.0_4319.1_32654.t1 | 4 | 1 | zf-CXXC | 100 | 105 | 1.1e-13 | 50.6 | 4.4 | 13000.0 | -4.0 |
| pfu_aug2.0_4319.1_32654.t1 | 2 | 1 | DNMT1-RFD | 148 | 282 | 1.4e-36 | 125.4 | 9.79999e-40 | 2.9e-36 | 124.3 |
| pfu_aug2.0_4319.1_32654.t1 | 4 | 2 | zf-CXXC | 389 | 432 | 1.1e-13 | 50.6 | 3.8e-17 | 1.1e-13 | 50.6 |
| pfu_aug2.0_4319.1_32654.t1 | 3 | 1 | BAH | 503 | 627 | 0.0 | 206.8 | 4.0e-24 | 1.2e-20 | 73.4 |
| pfu_aug2.0_4319.1_32654.t1 | 2 | 2 | DNMT1-RFD | 613 | 624 | 1.4e-36 | 125.4 | 1.8 | 5300.0 | -3.0 |
| pfu_aug2.0_4319.1_32654.t1 | 3 | 2 | BAH | 684 | 849 | 0.0 | 206.8 | 1.2e-22 | 3.5e-19 | 68.6 |
| pfu_aug2.0_4319.1_32654.t1 | 4 | 3 | zf-CXXC | 807 | 812 | 1.1e-13 | 50.6 | 0.67 | 2000.0 | -1.4 |
| pfu_aug2.0_4319.1_32654.t1 | 3 | 2 | DNA_methylase | 896 | 945 | 0.0 | 199.6 | 1.4e-08 | 4.1e-05 | 22.8 |
| pfu_aug2.0_4319.1_32654.t1 | 3 | 3 | BAH | 1072 | 1197 | 0.0 | 206.8 | 1.2e-22 | 3.6e-19 | 68.6 |
| pfu_aug2.0_4319.1_32654.t1 | 4 | 4 | zf-CXXC | 1155 | 1160 | 1.1e-13 | 50.6 | 0.67 | 2000.0 | -1.4 |
| pfu_aug2.0_4319.1_32654.t1 | 3 | 3 | DNA_methylase | 1244 | 1696 | 0.0 | 199.6 | 0.0 | 0.0 | 173.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4319.1_32654.t1 | gi|74136491|ref|NP_001028141.1| | DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_4319.1_32654.t1 | gi|395512631|ref|XP_003760539.1| | PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_4319.1_32654.t1 | gi|667286714|ref|XP_008576242.1| | PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Galeopterus variegatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4319.1_32654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4319.1_32654.t1 atgacacaaaaatatcattataccacaatacaatctcaggtaaaaaaggtagaggaagaagaggcaaaaagaacagctct ggaagtcagcagccgtccattacatccatgttcctcagaacgtagccctggaaaaagaaagtcaacagccgatgccgaaa aagaagttaaaaatgaggaggagaaagaccagaaaaagccgaaaatagacggagaagaacagtcggaaaactccaacaag gatgaaagtacaacaaccactagtacagatgaggcacctgttaaagtgttacccacaaaatgtcgtgaatgtaaacagct cctgaatgaccctgaccttcgtatttacccaggagatcccgatgaaagcctagaggagttcatagcattgacagatccca agttgtccgtatttacaggagaggaagatgaaatcaacacttatgacgagagacctcagcacaaaattactaatttcagt atatacgataagaacacccacttatgtccgtttgatacggggctgatagagaaaaacgtcctgttatacttcagtggaac aatcaagcccatctatgatgaaaaccccagtcctgaaggaggaataccagcaaccaagatgggaccaatcaatgaatggt ggacggcgggctttgatggcggagaaaacgctcttatcgggttcagcacagcatacgcggagtatatactgatgtcaccg agcgagatttatcagccttacatggacacgatgaaggagaagatccatatgagtaaagttgttattgagttcttacagaa taaccaggaagctacttacgaagacctgctcaacaaaatacagactacagtaccacctgcaggattgaccagtcttactg aggactccttactcaggcattcacagttcattgtcgaccaggtacagagctatgacgaggcagcagctgatgacgagaat cttctaattacgacaccatgtatgagagctctgatcaaactggctggtgttacactggggaaaaggcgtcagttgaggag ggagttgcataagagagataaagtcaagaagccggcctttaccatggccacagtgacacccctcgtacagcagatatttg acagtatatttgccggggagatagacgacaagaaaggccaggggggtaggaggaggaggtgtggcatttgtgaggtttgc caggcccctgactgtggtaaatgtaacgcatgtaaagatatggtcaagtttggtggacctggcacagctaaacaggcttg tgtagaaagaagatgtccgaatatggcaatgaaggaagcagacgaggatgatattttagaggataatgaagatgatgaca aacttgctgaggagagtaaattatccacacccacaaaagcacataaaatggggttaaatacaaagacaaaacttaaatgg gatggtgagccgtttaaagtggatggaaagaattcatattacaagtctgtatttgtaaacaatgaaaaggtggagatagg ggactttgtgtcggtgaagcctgaggatacatccataccagtgtacatagccagggtggtatacatgtgggagacgaact caggcaataaaatgttccactctcagtggttctgtcgaggtaatgacacgatactcggtgagactgccgatccacaagaa ttatttatggtggacgactgtgaagatatcaaactagaaactgtactctcacctgtacaggtggtgttcaagaagccggc cgatgattggttcatgcttggtggaatagaacacccggagacggacagtgtggtggaagacggcaaaagttactactacc agaaatggtatgatccagtgttagccagatttgaagacccgccaacgataaatgaagaggagattgaaaacaaatttaag ttctgccttgtatgtcgtcgcttagaggagctgcggaagaaagaaaatccagcagttggtgagaaattagaggatcagaa aacagagagtaaaactttctacggaagcgtggctcgggacggcataaattacaaagtaggagattgttgttatatagaac ctgacgcatttggattcaacgtacagcacgtccaaacaaagaaacctaaacaggagaagaaaaagattgacgatgagctc taccctgaggcatacagaaaaagtgactatgtgaaaggatctaatgaagatgttcctgaaccattcagaatcggacgtat tcaggaaatattctgcaaaaaatcagattctaaattactttatcccacagaagtaaaattaaaggtttcaaagttctaca ggccagagaacacccacaaaggtatgggggcatcacatcatgcagattttaatcaactttactggtccgatgaagaggcc acgatacatttcaaccgtgtctgtggtaaatgctcagtagtgtacagtgagaatattaaagacctaacagaatactccac caaatgtcctgataacttctacttcactgaggcttatgacagcgaaacaaaggagtttgaggaacctccgagtacagcta gacagatgggtagtaagggaaagggaaaaggaaaagggaagggaaaagggaaggggaaaagttcagtgcctgtggctgag gaggtaacggaggacgcgacagacaaattagagatccgtagattacgagggctcgatgtgttcgcaggatgtggaggtat atcggagggtttccaccaggctggtattgccgattcccgctgggctatagagaaagaagagcctgctgcccaggctttca ggctcaataacccagggtgtacagtcttcactgatgattgtaaccagctgctcaggctcgtaatgaatgtaagtagtcat ggattgcacatgtatgatccagtgttagccagatttgaagacccaccaactatagacgaagatgagattgaaaacaaatt taaattctgccttgtatgtcgtcgcttagaggagctacgcaagaaagaaaatccagcagttggtgagaaattagaggatc agaaaacagagagtaaaactttctacggtagtgttgctcgggatggcataaattacaaagtaggagaatgttgttatata gaaccagacgcatttggatttaacgttcagcacgtccaaacaaagaaaccaaaacaagagaagaaaaagattgacgatga gctctaccctgaggcatacaggaaaagtgactatgtgaaaggatctaatgaagatgttcctgagccattcagaataggac gtattcaggaaatattctgcaaaaaatcagattctaaattactttatcccacagaagtgaaattaaaggtttcaaagttc tacagaccagagaacacccacaaaggtatgggggcatcacatcacgcagattttaatcaactttactggtccgatgaaga ggccacgatacatttcaaccgtgtctgcggtaaatgctcagtagtgtacagtgagaatattaaagacctaacagaatact ccaccaaatgtcctgataacttctacttcactgaggcttatgacagcgaaacaaaggagtttgaggagcctccgagtaca gctagacagatgggtagtaagggaaagggaaaaggaaaagggaagggaaaaggaaaggggaaaagttccgtacctgtggc tgaggaggtaacggaggatgcggcagaaaaattagagatccgtagattacgagggctcgatgtgttcgcaggatgtggag gtatatcggagggtttccatcaggctggtattgctgattcccgctgggctatagagaaagaagagcctgctgcccaggct ttcaggctcaataacccagggtgtacagtctttactgatgattgtaaccagctgctcaggctcgtaatgaatggtcacac tgccaatgatatgggacagaagttgccacagaaaggggacgtagaattactgtgtggggggccgccatgccaggggttca gtggtatgaacaggtttaactccagggaatactctagattcaagaattccttgatagcaagttaccttagttactgtgat tactatcgacccagatacttcctgttagagaatgtgaggaactttgtctcgtttaaacgtagcatggtgttgaagctagc gttacgttgccttctcaggatgggatatcagtgtacatttggtgtactacaagctggaagctacggagtcgcacagacta gaagaagggccattattttggcagcagcccctggagagaagcttccgttttacccagagcctcagcacgtgttctctgcc agaagtaccagcctctctgtacaagtaggcgatagaaagttcagctctaacatcacacgtatccaatcggcgccgttccg tactgtaaccgtcagagacacgatgtccgatctccctgaaatccggaacggagcaaaatcagaggagatctcataccaag gtgatgccaaatctaacttccagagactgattcgaggtaagcagcaccagcctattctgcgagaccatatttgtaaggag atgagccccctggtggcagtacgcatgcagcacatccccctgtctccggggtcagactggagagatctacctaatataga agtcaggctgtcagacggaaataaaacaaagaaactgcagtacacccatcatgacaagaagcaaggccgaggaccaagtg gggctctaagaggtgtgtgctcgtgtgctgagggtaaagcctgcgaccccatggaccgtcagtttaacaccttggtcccc tggtgtctgccccacactagtaacagacataataactgggcaggactgtacggacgtctgcagtgggacggattcttcag taccaccatcactaaccctgaaccaatgggaaaacaggggcgtgtgttacaccctgagcagcatcgagtagtgagtgtga gggagtgtgccagatcacaaggtttcccggacacatacaggttctttggaaacattctggataaacacagacaggttggc aatgctgtaccaccacccatggcaaaacacataggtctcgagatccgtaaatgtctggaatggaaggcaaagcacggcaa gttagagaccgtgaaagaagaaacggaggtagaaaaaactgaggtaaaggaagatatggaaattgagattgttaaggaag agaaaactctggaaccgtcaccaagcaaagctgggtcgtctagtcgataa |
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Protein
| Protein ID | pfu_aug2.0_4319.1_32654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4319.1_32654.t1 MTQKYHYTTIQSQVKKVEEEEAKRTALEVSSRPLHPCSSERSPGKRKSTADAEKEVKNEEEKDQKKPKIDGEEQSENSNK DESTTTTSTDEAPVKVLPTKCRECKQLLNDPDLRIYPGDPDESLEEFIALTDPKLSVFTGEEDEINTYDERPQHKITNFS IYDKNTHLCPFDTGLIEKNVLLYFSGTIKPIYDENPSPEGGIPATKMGPINEWWTAGFDGGENALIGFSTAYAEYILMSP SEIYQPYMDTMKEKIHMSKVVIEFLQNNQEATYEDLLNKIQTTVPPAGLTSLTEDSLLRHSQFIVDQVQSYDEAAADDEN LLITTPCMRALIKLAGVTLGKRRQLRRELHKRDKVKKPAFTMATVTPLVQQIFDSIFAGEIDDKKGQGGRRRRCGICEVC QAPDCGKCNACKDMVKFGGPGTAKQACVERRCPNMAMKEADEDDILEDNEDDDKLAEESKLSTPTKAHKMGLNTKTKLKW DGEPFKVDGKNSYYKSVFVNNEKVEIGDFVSVKPEDTSIPVYIARVVYMWETNSGNKMFHSQWFCRGNDTILGETADPQE LFMVDDCEDIKLETVLSPVQVVFKKPADDWFMLGGIEHPETDSVVEDGKSYYYQKWYDPVLARFEDPPTINEEEIENKFK FCLVCRRLEELRKKENPAVGEKLEDQKTESKTFYGSVARDGINYKVGDCCYIEPDAFGFNVQHVQTKKPKQEKKKIDDEL YPEAYRKSDYVKGSNEDVPEPFRIGRIQEIFCKKSDSKLLYPTEVKLKVSKFYRPENTHKGMGASHHADFNQLYWSDEEA TIHFNRVCGKCSVVYSENIKDLTEYSTKCPDNFYFTEAYDSETKEFEEPPSTARQMGSKGKGKGKGKGKGKGKSSVPVAE EVTEDATDKLEIRRLRGLDVFAGCGGISEGFHQAGIADSRWAIEKEEPAAQAFRLNNPGCTVFTDDCNQLLRLVMNVSSH GLHMYDPVLARFEDPPTIDEDEIENKFKFCLVCRRLEELRKKENPAVGEKLEDQKTESKTFYGSVARDGINYKVGECCYI EPDAFGFNVQHVQTKKPKQEKKKIDDELYPEAYRKSDYVKGSNEDVPEPFRIGRIQEIFCKKSDSKLLYPTEVKLKVSKF YRPENTHKGMGASHHADFNQLYWSDEEATIHFNRVCGKCSVVYSENIKDLTEYSTKCPDNFYFTEAYDSETKEFEEPPST ARQMGSKGKGKGKGKGKGKGKSSVPVAEEVTEDAAEKLEIRRLRGLDVFAGCGGISEGFHQAGIADSRWAIEKEEPAAQA FRLNNPGCTVFTDDCNQLLRLVMNGHTANDMGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSRFKNSLIASYLSYCD YYRPRYFLLENVRNFVSFKRSMVLKLALRCLLRMGYQCTFGVLQAGSYGVAQTRRRAIILAAAPGEKLPFYPEPQHVFSA RSTSLSVQVGDRKFSSNITRIQSAPFRTVTVRDTMSDLPEIRNGAKSEEISYQGDAKSNFQRLIRGKQHQPILRDHICKE MSPLVAVRMQHIPLSPGSDWRDLPNIEVRLSDGNKTKKLQYTHHDKKQGRGPSGALRGVCSCAEGKACDPMDRQFNTLVP WCLPHTSNRHNNWAGLYGRLQWDGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVG NAVPPPMAKHIGLEIRKCLEWKAKHGKLETVKEETEVEKTEVKEDMEIEIVKEEKTLEPSPSKAGSSSR |
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