Gene
| Gene Model ID | pfu_aug2.0_4319.1_32655 |
|---|---|
| Locus | scaffold4319.1 : 37433 ... 43442 : - |
| To GenomeBrowser | scaffold4319.1:37433..43442 |
| Genes list of scaffold | scaffold4319.1 |
| Synonym | pfu_aug1.0_1485.1_07972 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4319.1_32655.t1 | 5 | 1 | DMAP_binding | 1 | 27 | 2.4e-06 | 28.1 | 1.6e-10 | 2.4e-06 | 28.1 |
| pfu_aug2.0_4319.1_32655.t1 | 5 | 2 | DMAP_binding | 29 | 130 | 2.4e-06 | 28.1 | 9.5e-06 | 0.14 | 12.7 |
| pfu_aug2.0_4319.1_32655.t1 | 5 | 3 | DMAP_binding | 199 | 233 | 2.4e-06 | 28.1 | 0.066 | 980.0 | 0.3 |
| pfu_aug2.0_4319.1_32655.t1 | 5 | 4 | DMAP_binding | 293 | 314 | 2.4e-06 | 28.1 | 0.47 | 7000.0 | -2.4 |
| pfu_aug2.0_4319.1_32655.t1 | 5 | 5 | DMAP_binding | 362 | 389 | 2.4e-06 | 28.1 | 0.15 | 2300.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4319.1_32655.t1 | gi|585694241|ref|XP_006821784.1| | PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Saccoglossus kowalevskii] | 5.0e-32 |
| pfu_aug2.0_4319.1_32655.t1 | gi|564240619|ref|XP_006277141.1| | PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Alligator mississippiensis] | 9.0e-23 |
| pfu_aug2.0_4319.1_32655.t1 | gi|557281206|ref|XP_006023572.1| | PREDICTED: DNA (cytosine-5)-methyltransferase 1, partial [Alligator sinensis] | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_4319.1_32655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4319.1_32655.t1 gttgaaggagctagagactgagtttgatgaaggggatatcacagaaaagggatactggaagaaaaaatgtaaactgtttg acggtttacttcctgatgatgccgtagagttagtacagggacttgagaaagctcttactgaaaagattattactgagaaa ggatactacaagaacttgaagaaagtatttgacaaagtgtttgactgtgagacaggtaaattcaaagtagcggacgaggt ccccacgaaaaatggaaatcattctgccgatgaggtcatcgatcgtgaaaatggagacactgatgttgtagcggaagtaa gttctaacaatgctgaacaaaatggtcaggctgaagaagacaagaaggaagaagaaaagcaagaggagaaacagaatggt gaagaaaagaaagatgtttccatggaggaagacatggatgttgacagtgaaaaattagaagaaaaacaggaaaatgaagg taaaaaaggtagaggtagaagaggcaaaaagaacagcacaggaagtcagcagccctccattacatccatgttccttagaa cccctggaaaaagaaagtcaacagccgatgccgaaaaagaaataaaaaacgaggaggagaaagaccagaaaaagccgaaa atagacggtgaagaacagacggaaaactccaacaaggatgaaggtaccacagcctccagtacagaggaggcacctgttaa agtgttacccacaaaatgtcgtgaatgtaaacagctcctgaacgaccctgaccttcgtatttatccaggagatcctgatg aaagtctagaggagtttatagcgctgacagatcccaagttgtccgtatttacaggagaggaagatgaaatcaacacttat gatgagagacctcagcacaaaattactaatttcagaaaaaataaataccacaaagttggccaccgaagcatgacttcggc aatgttcggaattgtacattttcatacccctgagccccagggtgttagaaaatggnttgatcgtgaaaatggagacacca ttgttgtagctgaagtaagttctaaccttgctgaacaaaacggtcaggctgaagaagaaaagaaggaagaagaaaagcac gaagaagaaaaacagaatggtgaagaaaagaaagatgtttcaatggaggttactacattacttatgctcttagactacat gtag |
|
Protein
| Protein ID | pfu_aug2.0_4319.1_32655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4319.1_32655.t1 LKELETEFDEGDITEKGYWKKKCKLFDGLLPDDAVELVQGLEKALTEKIITEKGYYKNLKKVFDKVFDCETGKFKVADEV PTKNGNHSADEVIDRENGDTDVVAEVSSNNAEQNGQAEEDKKEEEKQEEKQNGEEKKDVSMEEDMDVDSEKLEEKQENEG KKGRGRRGKKNSTGSQQPSITSMFLRTPGKRKSTADAEKEIKNEEEKDQKKPKIDGEEQTENSNKDEGTTASSTEEAPVK VLPTKCRECKQLLNDPDLRIYPGDPDESLEEFIALTDPKLSVFTGEEDEINTYDERPQHKITNFRKNKYHKVGHRSMTSA MFGIVHFHTPEPQGVRKWXDRENGDTIVVAEVSSNLAEQNGQAEEEKKEEEKHEEEKQNGEEKKDVSMEVTTLLMLLDYM |
|