Gene
| Gene Model ID | pfu_aug2.0_433.1_10766 |
|---|---|
| Locus | scaffold433.1 : 73017 ... 119695 : - |
| To GenomeBrowser | scaffold433.1:73017..119695 |
| Genes list of scaffold | scaffold433.1 |
| Synonym | pfu_aug1.0_13173.1_39462 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| troponin i | GO:0009792 GO:0030017 GO:0030172 GO:0043050 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_433.1_10766.t2 | 4 | 1 | Troponin | 5 | 19 | 3.9e-31 | 107.8 | 0.18 | 2700.0 | -1.7 |
| pfu_aug2.0_433.1_10766.t2 | 4 | 2 | Troponin | 79 | 131 | 3.9e-31 | 107.8 | 1.0 | 15000.0 | -6.5 |
| pfu_aug2.0_433.1_10766.t2 | 4 | 3 | Troponin | 115 | 168 | 3.9e-31 | 107.8 | 1.0 | 15000.0 | -8.3 |
| pfu_aug2.0_433.1_10766.t2 | 4 | 4 | Troponin | 179 | 302 | 3.9e-31 | 107.8 | 2.6e-35 | 3.9e-31 | 107.8 |
Transcript
| Transcript ID | pfu_aug2.0_433.1_10766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_433.1_10766.t1 atgagctcactagaagaaagacgtgaagcacgcagaaggaggaggcagcaacaggaagaagcagagtcctcaggagtagc agctgaagaggaaacctccacacgtcgcagcaggaggcggggcactgaggacgatatagccacagaggaatcttcgtata ccagtactcgctcgcgcagacgtagaggcggtgatgaggaggaaactgactctgcaccagcggctgtagattcaacagac aacgcagaggctgaaagagccgcacaggaagcagctgaagccgaggagaggaggcgtcaagaagaggcggctgagaggcg ccgacgggaagaggaagaagacaacagaagagctgaggaagaagagcgcagacgagaagaagctgaaagaagaagaaggg aagaagaagaacgagcagagcgggaacgtttagagaaagaagaggctgaaagagaagcagcaagaatggccgaagaacaa gcaagaaaaaagaaatccaagaggaagggtctaggaggccttgaccccgaaaagaagaaaaaactcaaagccataattat gaagaaggcggccgatgaattgaaagctcaggctcttgctaaggccgaggaacgcgaacgttatatcaatgagagagtac ccccatgcgaaacagatggaaaaggagaggctgaacttattaagctgtgcaagtctctccatgatgtggtcgcaaagtta gaggaagaattatatgacactgaacaaaagattcgcaaacaggactatgatataaatgctttaacattaaagataaatga cgccaagggtaaatttataaagccagtcctgagaaaagtcaacaaagaaagcaaatttgacaaattagccaagtcgaaag cagattttcgtgaaaatttgaaacattcagttttgttttcagaaggaataagtatcgtgaatgggttcagagctagctat tctttgagcaggtag |
|
| Transcript ID | pfu_aug2.0_433.1_10766.t2 |
| Definition | - |
>pfu_aug2.0_433.1_10766.t2 atgagctcactagaagaaagacgtgaagcacgcagaaggaggaggcagcaacaggaagaagcagagtcctcaggagtagc agctgaagaggaaacctccacacgtcgcagcaggaggcggggcactgaggacgatatagccacagaggaatcttcgtata ccagtactcgctcgcgcagacgtagaggcggtgatgaggaggaaactgactctgcaccagcggctgtagattcaacagac aacgcagaggctgaaagagccgcacaggaagcagctgaagccgaggagaggaggcgtcaagaagaggcggctgagaggcg ccgacgggaagaggaagaagacaacagaagagctgaggaagaagagcgcagacgagaagaagctgaaagaagaagaaggg aagaagaagaacgagcagagcgggaacgtttagagaaagaagaggctgaaagagaagcagcaagaatggccgaagaacaa gcaagaaaaaagaaatccaagaggaagggtctaggaggccttgaccccgaaaagaagaaaaaactcaaagccataattat gaagaaggcggccgatgaattgaaagctcaggctcttgctaaggccgaggaacgcgaacgttatatcaatgagagagtac ccccatgcgaaacagatggaaaaggagaggctgaacttattaagctgtgcaagtctctccatgatgtggtcgcaaagtta gaggaagaattatatgacactgaacaaaagattcgcaaacaggactatgatataaatgctttaacattaaagataaatga cgccaagggtaaatttataaagccagtcctgagaaaagtcaacaaagaaagcaaatatgacaaagtcaagaaagcacaat ctgattttcgatcaaaccttaagtcaacgggacagagtaaatttacaatagaagagggagaggagaagtcagttttgttt tcagaaggaataagtatcgtgaatgggttcagagctagctattctttgagcaggtag |
|
Protein
| Protein ID | pfu_aug2.0_433.1_10766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_433.1_10766.t1 MSSLEERREARRRRRQQQEEAESSGVAAEEETSTRRSRRRGTEDDIATEESSYTSTRSRRRRGGDEEETDSAPAAVDSTD NAEAERAAQEAAEAEERRRQEEAAERRRREEEEDNRRAEEEERRREEAERRRREEEERAERERLEKEEAEREAARMAEEQ ARKKKSKRKGLGGLDPEKKKKLKAIIMKKAADELKAQALAKAEERERYINERVPPCETDGKGEAELIKLCKSLHDVVAKL EEELYDTEQKIRKQDYDINALTLKINDAKGKFIKPVLRKVNKESKFDKLAKSKADFRENLKHSVLFSEGISIVNGFRASY SLSR |
|
| Protein ID | pfu_aug2.0_433.1_10766.t2 |
| Definition | - |
>pfu_aug2.0_433.1_10766.t2 MSSLEERREARRRRRQQQEEAESSGVAAEEETSTRRSRRRGTEDDIATEESSYTSTRSRRRRGGDEEETDSAPAAVDSTD NAEAERAAQEAAEAEERRRQEEAAERRRREEEEDNRRAEEEERRREEAERRRREEEERAERERLEKEEAEREAARMAEEQ ARKKKSKRKGLGGLDPEKKKKLKAIIMKKAADELKAQALAKAEERERYINERVPPCETDGKGEAELIKLCKSLHDVVAKL EEELYDTEQKIRKQDYDINALTLKINDAKGKFIKPVLRKVNKESKYDKVKKAQSDFRSNLKSTGQSKFTIEEGEEKSVLF SEGISIVNGFRASYSLSR |
|