Gene
| Gene Model ID | pfu_aug2.0_433.1_10771 |
|---|---|
| Locus | scaffold433.1 : 279226 ... 295073 : + |
| To GenomeBrowser | scaffold433.1:279226..295073 |
| Genes list of scaffold | scaffold433.1 |
| Synonym | pfu_aug1.0_7784.1_24285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_433.1_10771.t1 | 2 | 1 | NACHT | 215 | 384 | 5.5e-12 | 45.6 | 2.8e-15 | 2.1e-11 | 43.7 |
| pfu_aug2.0_433.1_10771.t1 | 2 | 2 | NACHT | 583 | 607 | 5.5e-12 | 45.6 | 0.94 | 7000.0 | -3.5 |
Transcript
| Transcript ID | pfu_aug2.0_433.1_10771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_433.1_10771.t1 atggcatcccaaaacaggtttttagacttggagactgtccaacgcgttcatgttgaattgagagcgcagctttgctgtga tttcctcaatgaagatacatgtaagaacgagtttacaagattcaaattaagatgccgggatcatttaaaaagtcccgatg aacaaagtttgtccgttccttttgaaatcttggataagcttgaagcgaaaggcctgtttgtggaagaaaaatatgatatt ctaaaagaattactccgaggctacgcagcagcacttgatttgataacagaagcagagaatagaattgcatggataaaagc aaaattagcttcaccaccggcaaaaaagaagaaaatggagaacacagaatctgctttagaggccaatgttaacggagaag ttgtgacaaacttgagagaccgattgatagaaataaatacactcgaaactgaaaatataccaatgacacctttccgtgat gacttgaagatgccggttgaacaattgtacgcttcagttgttatcagagaggacatgaagtataacagtagaaaacgagg gtttgctggaaattgggaaaaacacaaaaagaaaactgtaaaaagtccaggtgatctgctttatgtagatggaaaatatg ccagacggatatacatgcaaggggatgctgctagaggtaaaacaacatactgcctatggttgttgaatcaatggtgtgat gctaaaaggaatacagatatatttcaaaatgaatggcaaagagcaatgaacgaatttgattttgcattttacatacctct gcgatctgtccagcaatcaagaattacagtggcggatatgatatgtaaggatgtattacacgaataccctaacctgcatc aaacaacagagcatatattattcaacgagaaatataaatgcctcatacttattgacgggttggatgaatggaatcaggag gatcaagatattcaaaaactcagatgcaagtctttaccaaactttgatgggatattgaattgtgtatatcttattacaat gcggccaatgagattcaatgctgttgcccaatctattcaaaataatgacaaagtgatcgaaatgagaggacttaatagaa gaggaattagaaaagtaataaagaacgtactgataaatcatttcggactgattcacaaatctcagaaatataggataaga tatcgtgaaattgacgattttttgagcggaccaacacttgattcttttgttcagatccctatcgttgctgttatgtgtgt tcagataaaatataaaagactatgtgagccgaatagcatgacaggtttctttgctgttatgatagatatgataattgaaa gagcatgtcaaaaggataataaattgcattcccctgaaccacaagttgacgcgagcttaccaaaaccattgtctgaatac gaaaatattaaaaagtattatgggatccttttaaaattaggtaaagtggcatacgaaggtattatgaataaacaacaaaa acttctattcaaagaaggaaagttagataaagagatcagaatggaagagttacagtttgctctagatgcaggattgataa gtcagagggataaatcaactgaaatatcgaagaatgtacaaattgagttcttccactcatctattcaggaatacctggct accatttatatcatgtctagggaagagataaaaaaatcattctgctctaatctgatcaatgacaaaaatttaagtgaact acacaatatcattatgtttattttcggattgtgtccatcacttggaagcgctgtgacagaacaactattcagtctcgtaa atgatataagtcacagcaatgaacttccatactccgaagacagtttagtttttctgatgatatggtaccagattgaagtc agttggtacagagagttatttgcaacaacagaaaagactatgatgacatttaaagtattgttcatgtatctgtcaaaaca ctctgatcaagaggaagtggaagttacaaaaagaatcctggttgatgataatatccttataaagttcatgttttttgatt ccgtacctgcggatggagaatgctgcatcactgacaaagagctgaatgtattcttagctaactcagagaggattaattcc ttgtggaccctccaaatatgtggtcgttcaacagaccgatccatccacacgatatctggaagttctattgagaatctggt tttatctgatgtaaaggtatccaaaatggatgataatgaggttgaatgccctccacttctaggcgatttgccaaaactca tccgtttaagactagcaaatattagcttaaatgacgggaaacttggtttctcatctgaaatgatctctttaaggtatata tggtttcgatgtgtcaatatgtcagtttcagaatggcaattattcattagaattttatcagatgaagaacggagaataga tgttaagttataccatacaaatatcgacgaaagctctatagaaatagtcaaatcatctccgaagttcgaagaaagaaaga aagacatgaataagctattcttcgtaagaaaatgtccaacgccacaagcttcttctgatgcaaacgatcgtgatcatcta gctgaatacatagacctctatgtagagagtgattgcaatttatatagcgacgatagtttggatactgacgacgacgatga tgatgcctataatgaagatggcgatgatgatggcgacgactatggtgatgatgatgatggcgacgacaatggtgatgatg atgatgatggcgacgactatggtgacgatgatgatggcgacgactatggtgacgatgatgatggcgacgactatgagtgg aggatttttactgttattctctgttattga |
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Protein
| Protein ID | pfu_aug2.0_433.1_10771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_433.1_10771.t1 MASQNRFLDLETVQRVHVELRAQLCCDFLNEDTCKNEFTRFKLRCRDHLKSPDEQSLSVPFEILDKLEAKGLFVEEKYDI LKELLRGYAAALDLITEAENRIAWIKAKLASPPAKKKKMENTESALEANVNGEVVTNLRDRLIEINTLETENIPMTPFRD DLKMPVEQLYASVVIREDMKYNSRKRGFAGNWEKHKKKTVKSPGDLLYVDGKYARRIYMQGDAARGKTTYCLWLLNQWCD AKRNTDIFQNEWQRAMNEFDFAFYIPLRSVQQSRITVADMICKDVLHEYPNLHQTTEHILFNEKYKCLILIDGLDEWNQE DQDIQKLRCKSLPNFDGILNCVYLITMRPMRFNAVAQSIQNNDKVIEMRGLNRRGIRKVIKNVLINHFGLIHKSQKYRIR YREIDDFLSGPTLDSFVQIPIVAVMCVQIKYKRLCEPNSMTGFFAVMIDMIIERACQKDNKLHSPEPQVDASLPKPLSEY ENIKKYYGILLKLGKVAYEGIMNKQQKLLFKEGKLDKEIRMEELQFALDAGLISQRDKSTEISKNVQIEFFHSSIQEYLA TIYIMSREEIKKSFCSNLINDKNLSELHNIIMFIFGLCPSLGSAVTEQLFSLVNDISHSNELPYSEDSLVFLMIWYQIEV SWYRELFATTEKTMMTFKVLFMYLSKHSDQEEVEVTKRILVDDNILIKFMFFDSVPADGECCITDKELNVFLANSERINS LWTLQICGRSTDRSIHTISGSSIENLVLSDVKVSKMDDNEVECPPLLGDLPKLIRLRLANISLNDGKLGFSSEMISLRYI WFRCVNMSVSEWQLFIRILSDEERRIDVKLYHTNIDESSIEIVKSSPKFEERKKDMNKLFFVRKCPTPQASSDANDRDHL AEYIDLYVESDCNLYSDDSLDTDDDDDDAYNEDGDDDGDDYGDDDDGDDNGDDDDDGDDYGDDDDGDDYGDDDDGDDYEW RIFTVILCY |
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