Gene
| Gene Model ID | pfu_aug2.0_4331.1_05979 |
|---|---|
| Locus | scaffold4331.1 : 23096 ... 28370 : + |
| To GenomeBrowser | scaffold4331.1:23096..28370 |
| Genes list of scaffold | scaffold4331.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4331.1_05979.t1 | 1 | 1 | UPF0047 | 2 | 83 | 3.8e-30 | 104.1 | 2.7e-34 | 4.1e-30 | 104.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4331.1_05979.t1 | gi|242022055|ref|XP_002431457.1| | conserved hypothetical protein [Pediculus humanus corporis] | 9.80909e-45 |
| pfu_aug2.0_4331.1_05979.t1 | gi|91088067|ref|XP_967758.1| | PREDICTED: UPF0047 protein C4A8.02c [Tribolium castaneum] | 1.96182e-44 |
| pfu_aug2.0_4331.1_05979.t1 | gi|170028586|ref|XP_001842176.1| | conserved hypothetical protein [Culex quinquefasciatus] | 4.06377e-44 |
| pfu_aug2.0_4331.1_05979.t1 | gi|512928924|ref|XP_004931699.1| | PREDICTED: UPF0047 protein C4A8.02c isoform X1 [Bombyx mori] | 6.02558e-44 |
| pfu_aug2.0_4331.1_05979.t1 | gi|240848905|ref|NP_001155505.1| | uncharacterized protein LOC100161850 [Acyrthosiphon pisum] | 6.02558e-44 |
Transcript
| Transcript ID | pfu_aug2.0_4331.1_05979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4331.1_05979.t1 atgaactgggatccagatgtcagaatagacatggagatgatgattaataaactaattccagagagcacccctttcaaaca tagctgtgagggacctgacgacatgccggctcacattaaagctgcctttataggaaccagtgtaacaatacctatcacaa acggtaaacttaatctcggaacatggcagggactatggttgtgtgaacatagaaatcatgcaggtaaacggacattagtc gctacagtcaacggtgctaagaaatga |
|
Protein
| Protein ID | pfu_aug2.0_4331.1_05979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4331.1_05979.t1 MNWDPDVRIDMEMMINKLIPESTPFKHSCEGPDDMPAHIKAAFIGTSVTIPITNGKLNLGTWQGLWLCEHRNHAGKRTLV ATVNGAKK |
|