Gene
| Gene Model ID | pfu_aug2.0_4331.1_05980 |
|---|---|
| Locus | scaffold4331.1 : 30227 ... 31245 : - |
| To GenomeBrowser | scaffold4331.1:30227..31245 |
| Genes list of scaffold | scaffold4331.1 |
| Synonym | pfu_aug1.0_13039.1_61142 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4331.1_05980.t1 | 3 | 1 | Ank_2 | 9 | 95 | 5.1e-29 | 100.4 | 2.7e-13 | 6.8e-10 | 39.1 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 1 | Ank_5 | 33 | 46 | 3.1e-18 | 65.3 | 1.7 | 4100.0 | -1.8 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 1 | Ank | 38 | 61 | 6.3e-29 | 98.3 | 3.6e-06 | 0.009 | 15.7 |
| pfu_aug2.0_4331.1_05980.t1 | 4 | 1 | Ank_4 | 38 | 61 | 2.6e-19 | 69.2 | 0.00013 | 0.32 | 11.5 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 1 | Ank_3 | 38 | 61 | 3.6e-19 | 66.9 | 0.0002 | 0.49 | 10.7 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 2 | Ank_5 | 53 | 109 | 3.1e-18 | 65.3 | 2.6e-13 | 6.3e-10 | 38.9 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 2 | Ank | 67 | 98 | 6.3e-29 | 98.3 | 5.6e-08 | 0.00014 | 21.5 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 2 | Ank_3 | 67 | 96 | 3.6e-19 | 66.9 | 4.0e-07 | 0.00098 | 19.1 |
| pfu_aug2.0_4331.1_05980.t1 | 4 | 2 | Ank_4 | 68 | 121 | 2.6e-19 | 69.2 | 3.2e-12 | 7.9e-09 | 35.7 |
| pfu_aug2.0_4331.1_05980.t1 | 3 | 2 | Ank_2 | 75 | 163 | 5.1e-29 | 100.4 | 4.3e-20 | 1.1e-16 | 60.9 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 3 | Ank_5 | 96 | 139 | 3.1e-18 | 65.3 | 1.1e-06 | 0.0027 | 17.9 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 3 | Ank_3 | 102 | 129 | 3.6e-19 | 66.9 | 0.00018 | 0.43 | 10.9 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 3 | Ank | 103 | 132 | 6.3e-29 | 98.3 | 1.1e-08 | 2.8e-05 | 23.7 |
| pfu_aug2.0_4331.1_05980.t1 | 4 | 3 | Ank_4 | 121 | 155 | 2.6e-19 | 69.2 | 0.0041 | 10.0 | 6.7 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 4 | Ank_5 | 121 | 164 | 3.1e-18 | 65.3 | 5.1e-07 | 0.0013 | 18.9 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 4 | Ank | 137 | 163 | 6.3e-29 | 98.3 | 8.7e-08 | 0.00022 | 20.8 |
| pfu_aug2.0_4331.1_05980.t1 | 4 | 4 | Ank_4 | 137 | 191 | 2.6e-19 | 69.2 | 1.1e-07 | 0.00026 | 21.3 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 4 | Ank_3 | 137 | 162 | 3.6e-19 | 66.9 | 4.9e-05 | 0.12 | 12.6 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 5 | Ank_5 | 166 | 191 | 3.1e-18 | 65.3 | 0.0005 | 1.2 | 9.4 |
| pfu_aug2.0_4331.1_05980.t1 | 3 | 3 | Ank_2 | 172 | 197 | 5.1e-29 | 100.4 | 0.00023 | 0.58 | 10.5 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 5 | Ank | 173 | 195 | 6.3e-29 | 98.3 | 6.4e-06 | 0.016 | 15.0 |
| pfu_aug2.0_4331.1_05980.t1 | 5 | 5 | Ank_3 | 173 | 196 | 3.6e-19 | 66.9 | 0.00032 | 0.79 | 10.1 |
| pfu_aug2.0_4331.1_05980.t1 | 1 | 1 | SOCS_box | 228 | 261 | 7.9e-07 | 28.8 | 6.5e-10 | 1.6e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4331.1_05980.t1 | gi|548354346|ref|XP_005729395.1| | PREDICTED: ankyrin-1-like [Pundamilia nyererei] | 1.0e-16 |
| pfu_aug2.0_4331.1_05980.t1 | gi|498925211|ref|XP_004538382.1| | 1.0e-16 | |
| pfu_aug2.0_4331.1_05980.t1 | gi|498925213|ref|XP_004538383.1| | PREDICTED: ankyrin-1-like isoform X4 [Maylandia zebra] | 1.0e-16 |
| pfu_aug2.0_4331.1_05980.t1 | gi|554843066|ref|XP_005931918.1| | PREDICTED: ankyrin-1-like [Haplochromis burtoni] | 2.0e-16 |
| pfu_aug2.0_4331.1_05980.t1 | gi|584001342|ref|XP_006795712.1| | PREDICTED: ankyrin-1-like [Neolamprologus brichardi] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_4331.1_05980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4331.1_05980.t1 atggaggagatactgcatgtagaccttattcaggctattatgaacagtgacaatgatggaggaaggagtatactagacca gggctgcagtcaagcaacgctagactctggcttatgttgggcaagtcgctacggaaataggtttatgttgcatttactga tagaaaagggagctaacccaaatggagagggttggggtggatttacgccccttatatgggcagctatgttttcaaataac gtagaagtgcttaatattcttattaatgccggcagtgatttggaccacacgtcgaacaaacgaagacaaacggcattaca cgctgccgtcattgctgacaaacgaggattcgttgaatgcttgcttaacgcaggagcaaatccggatcagcaagatttct tatataagacgccccttctccatgcagtccacaagaatctgtctcagtgtgttagtttactaatacagcacaactgtaac gtgaacagaactggctgggtgaacggaattagtacaactccacttctacttgccctagttcaaaataacttagaaatcac caagatgctgttacttgctggtgcaaagtttcagaaaattgcgatataccagacatataacataagacaatactacgcga ctgtggagaataacttgaatatggaagtgcgacccatctacctccagcaacagtgcagggtttgtatcagacatctgtta aagccaagatttctggaaaaactaaaagaaatgttactgcctaaaaagcttaaggaatatttagagattgttgagttatt tggttatgatagatga |
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Protein
| Protein ID | pfu_aug2.0_4331.1_05980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4331.1_05980.t1 MEEILHVDLIQAIMNSDNDGGRSILDQGCSQATLDSGLCWASRYGNRFMLHLLIEKGANPNGEGWGGFTPLIWAAMFSNN VEVLNILINAGSDLDHTSNKRRQTALHAAVIADKRGFVECLLNAGANPDQQDFLYKTPLLHAVHKNLSQCVSLLIQHNCN VNRTGWVNGISTTPLLLALVQNNLEITKMLLLAGAKFQKIAIYQTYNIRQYYATVENNLNMEVRPIYLQQQCRVCIRHLL KPRFLEKLKEMLLPKKLKEYLEIVELFGYDR |
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