Gene
| Gene Model ID | pfu_aug2.0_4341.1_05982 |
|---|---|
| Locus | scaffold4341.1 : 12784 ... 19545 : - |
| To GenomeBrowser | scaffold4341.1:12784..19545 |
| Genes list of scaffold | scaffold4341.1 |
| Synonym | pfu_aug1.0_5781.1_16764 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4341.1_05982.t1 | 1 | 1 | rve | 512 | 624 | 4.4e-25 | 88.1 | 1.4e-28 | 1.0e-24 | 86.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4341.1_05982.t1 | gi|641789034|ref|XP_008176374.1| | PREDICTED: uncharacterized protein LOC103307407, partial [Chrysemys picta bellii] | 8.0e-37 |
| pfu_aug2.0_4341.1_05982.t1 | gi|558224438|ref|XP_006136717.1| | PREDICTED: uncharacterized protein LOC102453629 [Pelodiscus sinensis] | 1.0e-34 |
| pfu_aug2.0_4341.1_05982.t1 | gi|558136508|ref|XP_006117566.1| | PREDICTED: uncharacterized protein LOC102457681 [Pelodiscus sinensis] | 1.0e-33 |
| pfu_aug2.0_4341.1_05982.t1 | gi|530588110|ref|XP_005287776.1| | PREDICTED: uncharacterized protein LOC101932938 [Chrysemys picta bellii] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_4341.1_05982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4341.1_05982.t1 atgccacctcctatcaacaaccaagctagcgaggaccaggaacctggaccctctggaacaaccgctggaaccccttcagt gatttcagaacttgttgaaaaattggatcatttaacacagcaaatgcagcaacagcagctccaagcacagactgcaaatc agcagatgtgggaacacatccaacaacaaattcgaggactacaacaccaaccaagtcctcaaaccagtgctacggtgcag atcgctccgtccgagagccaaccagatagagtggcacagatatggtttgccaacttggacgagaccttaaagcaatctct cgagacattgaaaggtgcgttcatgacaagattcaagccttcatcgaaacttaatatgaatttgatggacgtggaacaag gaccgttcgagtcagtggaagattacatccaccgagtgatgaccgccacctcagatcgtaccgttagttcggactggcta attcacgttgtaacacagggactacgcgagaagatccagtacgccgtcattcaacgggatccgcaaacaatggatgacct ccgtgatgctgcacagaaagccgagacatccgagaagttaatccaaaagaaacgcaccaaagaactggaaattcaagctg tgaacaaagtgtcgtggacgcaggaaaatggcggtactcatggacagcaaagtggatcaagacaatgcggacgatgtggt aggtcttgtgggtcacttaaattttgtagagctaaagataatttatgttatttttgtaacaaacaacatcagtttttgaa acaatgtcgaataaggaaggaagtcatgagaaacggtggttctggcaataacacgatggagatcccagacgcagaaaacc ctaacatttgtcttataaatactcagtcagggttagcacgcgcagacactgaaacaattattccaaaacgatctgaaact gaaatttgcgtgaaaatttcacgaagaaaacacaatgaagaggtgatgttagagccttcacaagaactaacactcctaaa tctcgcgacagccagatgtttggtcaaagtaagagcacagaccagtaaaagcaactgtgtagcagacgccctgagcagac gacagtatgatgcagacgagacagagacgacaaaccaagtccaaacagtaagtacggtgcatgataaacaagaaattact gaggtgcaaaatgtacatgagtctgcaaagcaaggtgtgtcggttaccttttgttatgcgacagacacagtcgctaagga caatgtcgtcctagatacggaacacaccaatcaggaaataggtgaaatgcagaaatcctttagagatttcgaattcatat accaatacttagtcgatggcagtctaccagcagacaaggccggtatagatagagttatcggcgaaaagatacttttggcc cggtatgcacaatgcatcaaatatgtcaaattttgtgatccatgtcaaaggtcaaagcgggattaccatccttttcatcc acctatgccaacttcccaaagatttgagcgctggcatatcgacatagtcggtctattgaacaaaacaaaagacgggtatg aatacattcttttatgcatagattcctgtacccgatggtcagaggcgtttccactgagaacccaaagcgccaaagagaca gcacaggttttgtataaagaaatttttaccagatatggtgcccctagagttttgttttcagacagaggccgaaattttat gtcgaatttggtgaacgcattgtgcgagatttttgaggtcacacagcaccacacgtcagcctaccacccaaacacaaacg gtatggttgaaagacagaacagtaccttggtaaatagcctgagaatgtattgtggaaaagagcagtcaaattggccagag ttattaccaagcgttatgatggccttccgtaagtctcctagcatgcattccacagagttctgtccctttaatcttgtttt tggcgaggagatgagattaccgtttgatgtctccttggaaccagctgataaattaggtaaggatgctaaagtaaatcctt ctctaatcaacgctataaacttgaagcgttatcatgatccaaacactcacagaacgggattcaaaccacaatcagattca gaaacagaaagtgaaacagattctgatgaatctgtagatgagactacgggaactccccaatctcattcagattcacagaa cagtcagggtaattctcagagaatatggaaaatcaataagttacctgtgggtcgttataaaaatggccgccgtgaaatac gggtagaatatgaaaatggagaaaaaacttgggaaccagacgatgttttcccgccagatgtgctcgagtacgtgaacaag agattcacgaaaatgggcaaattaagaaaaacatactttaagagaaagcagttctcacaaactaatgtataa |
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Protein
| Protein ID | pfu_aug2.0_4341.1_05982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4341.1_05982.t1 MPPPINNQASEDQEPGPSGTTAGTPSVISELVEKLDHLTQQMQQQQLQAQTANQQMWEHIQQQIRGLQHQPSPQTSATVQ IAPSESQPDRVAQIWFANLDETLKQSLETLKGAFMTRFKPSSKLNMNLMDVEQGPFESVEDYIHRVMTATSDRTVSSDWL IHVVTQGLREKIQYAVIQRDPQTMDDLRDAAQKAETSEKLIQKKRTKELEIQAVNKVSWTQENGGTHGQQSGSRQCGRCG RSCGSLKFCRAKDNLCYFCNKQHQFLKQCRIRKEVMRNGGSGNNTMEIPDAENPNICLINTQSGLARADTETIIPKRSET EICVKISRRKHNEEVMLEPSQELTLLNLATARCLVKVRAQTSKSNCVADALSRRQYDADETETTNQVQTVSTVHDKQEIT EVQNVHESAKQGVSVTFCYATDTVAKDNVVLDTEHTNQEIGEMQKSFRDFEFIYQYLVDGSLPADKAGIDRVIGEKILLA RYAQCIKYVKFCDPCQRSKRDYHPFHPPMPTSQRFERWHIDIVGLLNKTKDGYEYILLCIDSCTRWSEAFPLRTQSAKET AQVLYKEIFTRYGAPRVLFSDRGRNFMSNLVNALCEIFEVTQHHTSAYHPNTNGMVERQNSTLVNSLRMYCGKEQSNWPE LLPSVMMAFRKSPSMHSTEFCPFNLVFGEEMRLPFDVSLEPADKLGKDAKVNPSLINAINLKRYHDPNTHRTGFKPQSDS ETESETDSDESVDETTGTPQSHSDSQNSQGNSQRIWKINKLPVGRYKNGRREIRVEYENGEKTWEPDDVFPPDVLEYVNK RFTKMGKLRKTYFKRKQFSQTNV |
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