Gene
| Gene Model ID | pfu_aug2.0_4383.1_12644 |
|---|---|
| Locus | scaffold4383.1 : 5684 ... 11725 : - |
| To GenomeBrowser | scaffold4383.1:5684..11725 |
| Genes list of scaffold | scaffold4383.1 |
| Synonym | pfu_aug1.0_70902.1_34813 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4383.1_12644.t1 | 2 | 1 | Asp_protease_2 | 110 | 196 | 9.0e-06 | 26.1 | 2.3e-08 | 4.9e-05 | 23.7 |
| pfu_aug2.0_4383.1_12644.t1 | 2 | 2 | Asp_protease_2 | 473 | 498 | 9.0e-06 | 26.1 | 1.1 | 2300.0 | -0.9 |
| pfu_aug2.0_4383.1_12644.t1 | 1 | 1 | RVT_1 | 697 | 857 | 3.5e-21 | 75.5 | 2.8e-24 | 6.0e-21 | 74.7 |
| pfu_aug2.0_4383.1_12644.t1 | 1 | 1 | rve | 1242 | 1354 | 5.7e-22 | 78.0 | 5.6e-25 | 1.2e-21 | 77.0 |
Transcript
| Transcript ID | pfu_aug2.0_4383.1_12644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4383.1_12644.t1 atggaaaagtgctctgatcaaaaagaagaaaaaacacgttctgatgagaactctagtgacgatctgtctgaatctatcag taatatgagtggtcaaggtcacgagacagacagtgacacagaaactgagaggtcaaaatccaaaaagaaaaagaggtcaa ggacaactgtactaaagttgcctcttttcgacggaaacgagtcgtggaaaatctggaagaacagattcatagaattagta gagagacgaagatggccagatgataaaaagctggacgtcctgttacaaaagatgcagggcaccgcagatggtatatatgt taaaagaaaattaaacaatgtagatattgtatatactgcagatactggtgccacgaaaactgtggtatcagaaaagtttt atgagaatctaccagtagaatggaaaccaaagttggtaaagaaaagagctgttataacaggggcctccggagaaccattt cagttattaggcatgggtcactttgagatcaagcttggttcagtagctattacaaaagaattcatagttgcaaaaattga cgatgatgctcttttgggtatggatgtactacacgatgagtcgggtggagctgatattttgattagtgaagggatcattc ggatcaggggcgagagtctcccatgtgaacatcatagaacaccaagggttcgggccgctgaagacctaaaggtaccaggt ttcagtgaggctataatcaaagtgtatattgacagaagacaagttaaaaatgacaaatttgatcttcttgttgaaccatg tgatgaatttacgtcaaaaagcggtattgtagtggcatctactcttgtaaatatacagagaaaagtagctgtttctgtaa gggttttgaacccaagtccctgtgacgtggacatttatacaggaactgttgtaggcaatgctgaagtggttacggagtgt agtaaccctatttttgatgttgaggacccggatgaagaaaggaatatgtgttctatgagaagggttaaattaagaagatc tcttagtcaaatgtgcagtaaagtaaagcctgagcgcaagggtgtttctgttgaagttccggaccatttaaaagagttgt atgaagactctggaccaatgtgtagtagtaatgagaaagagagcatagttgatttgttaataaagcacgaagcagtgttt tcaaaacacgagtttgatattggaaaaactaatttggttgaacatgtaattgaaacaaaagaaagtaaacctgttaagca gcccccacaaagagttccttttgcttatgcagaggacgaaaagaaaactatactcaatgctgtcactgtccctgatgcat tttcactccctcgtatccaagacntccagttattaggcatgggtcactttgagatcaagcttggttcagtagctgttaca aaagaattaatagttgcaaaaattgacgatgatgctcttttgggtatggatgtactacacgatgagtcgggtggagctga tattttgattagtgaagggatcattcggatcaggggcgagagtctcccctgtgaaccttatagaacacgaagggttcggg ccgctgaagacctaaaggtaccaggtttcagtgaggctataatcaaagtgtgtattgacagaagacaagttgaaaatgac aaatttgatcttcttgttgaaccatgtgatgaatttacgtcaaaaagcggtattgtagtggcatctactcttgtaaatat acagagaaaagtagctgtttctgtgagggttttgaacccaagtccctgtgatgtggacatttatacaggaattgttgtag gcaatgctgaagtggttacggagtgtagtaaccctatttttgatgttgaggacccggatgaagagaggaatatgtgttct atgagaagggttaaattaagaagatctcttagtcaaatgtgcagtaaacaacccccacgaagagttccttttgcttatgc agaagacgaaaagaaaactatagaggaacttgaaaaacaaggcataataaggaagtcctcatcgccttgggcttcgcctt tagtaatggtgagaaagaaatctggtggtgtaagagtatgtgttgattatcgaaagctcaatgctgtcactgtccctgat gcattcccactccctcgtatccaagactgtttagacactgtagccggagcgcaatggttctctacttttgatttaacatc aggttaccatcaagtccctgtgaaagagtctgacaagtataaaactgcatttgttacaaagtacggattgtttgaataca ataccatgcctttcggtctgtgcaattcagccggcacttttcaaagagttatggaaatagctctaagcggcttgcaatgg gtcacgtgtctgatttatatagacgatgtagtttgtttcagtaaaaccttctcagaacatgtagagagagtgacagaaat tctaagtagaatacaaatggtgggcatgaagttaaaaccccagaaatgcagcttatttcaagctgaagtcaaattcttgg gacatgtagtcaataaagacggtgttaggccaaaccctgaaaatacaggaaaaataaaaaattggccagttccaaagtcg gttacagaagtgcggcaatttataggtttagcctcctactataggagatttataaggaattttgctcaaattgctcaacc catgcatcagttactgaagaaagataagaaatttgaatggtcgagtcaatgtcaagagtcatttgaaaatttgaaagaaa tgttaatgggtccagaaattatgtcttttccaagtgatcatggggaatacatattagatactgatgcctctgataccagt atagggtgtgttctgtcacaagtcaatgacggtcgtaaattcacaataagaacagatcatcaggctcttgtatggttgtt tcgaacaaaggatcccaaaggtagagttgctaggtggatcgagatcatgtctgctttccacttcacaatagagtatcgcc ctggtaacaagcatggcaatgctgacgccctgtcgaggtgtgaaaatccccttgactgtgtatgctctgaaatagatgac cttgaagaattaagatgtggtccttgtaagaaatgtagaaaaagatatgatagtaactatcaaattgacaaagtgagagc aataaatacaaggtcaaaagacaataaaaaagaaggtacttactggaaagatttatgtggagtagatgctgcacaaatga agcagttacaaattaacgatgacaatataggccccgtctataagtggaaaatcgaaggcacgaaaccttcaaagtcagat cttcagaagtgcagtccagaaacacgacattattgtcttttgtgggactcgccgcaaataaagaatgaaatcatgtgcaa gttgtattatcacaaagatgggctaggtgtacaagaacaaattattgtcccccttgncagtaactatcaaattgacaaag tgagagcaataaatacaaggtcaaaagacaataaaaaagaaggtcatttgggaagcaagaaaacatggcagaaaactaga acaaagttttattggtacgaaatgagagaagaagtcaacttgtatgtggcacaatgccacgcatgtgcagtatcaaaaat gcccaacaagcaaccgagagcaacattaggtcagatgttagtaagtgcacctatggatagagtctgtgtagatttattgg gtccattgccagtaacaccacgtagaaatagatatgtcttagttgtaatggactattttacaaaatgggttgaggtgtat ccaatagaagaccagagtgcaaaagcatgtgcagacagaatcatagatttcatttgcagatttggttgcccgtcatcttt gcattcagatcaagttaagtcgtttgagaacgaaatcttcaaagagttatgtaacctttttcaaatgaagaaaacgaggt catctccaaggaatccaaaatgtaatggaatggtcgagagatttaataagactttaatttcaatgataagggcctttttg aatgatgaagatgaaaactag |
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Protein
| Protein ID | pfu_aug2.0_4383.1_12644.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4383.1_12644.t1 MEKCSDQKEEKTRSDENSSDDLSESISNMSGQGHETDSDTETERSKSKKKKRSRTTVLKLPLFDGNESWKIWKNRFIELV ERRRWPDDKKLDVLLQKMQGTADGIYVKRKLNNVDIVYTADTGATKTVVSEKFYENLPVEWKPKLVKKRAVITGASGEPF QLLGMGHFEIKLGSVAITKEFIVAKIDDDALLGMDVLHDESGGADILISEGIIRIRGESLPCEHHRTPRVRAAEDLKVPG FSEAIIKVYIDRRQVKNDKFDLLVEPCDEFTSKSGIVVASTLVNIQRKVAVSVRVLNPSPCDVDIYTGTVVGNAEVVTEC SNPIFDVEDPDEERNMCSMRRVKLRRSLSQMCSKVKPERKGVSVEVPDHLKELYEDSGPMCSSNEKESIVDLLIKHEAVF SKHEFDIGKTNLVEHVIETKESKPVKQPPQRVPFAYAEDEKKTILNAVTVPDAFSLPRIQDXQLLGMGHFEIKLGSVAVT KELIVAKIDDDALLGMDVLHDESGGADILISEGIIRIRGESLPCEPYRTRRVRAAEDLKVPGFSEAIIKVCIDRRQVEND KFDLLVEPCDEFTSKSGIVVASTLVNIQRKVAVSVRVLNPSPCDVDIYTGIVVGNAEVVTECSNPIFDVEDPDEERNMCS MRRVKLRRSLSQMCSKQPPRRVPFAYAEDEKKTIEELEKQGIIRKSSSPWASPLVMVRKKSGGVRVCVDYRKLNAVTVPD AFPLPRIQDCLDTVAGAQWFSTFDLTSGYHQVPVKESDKYKTAFVTKYGLFEYNTMPFGLCNSAGTFQRVMEIALSGLQW VTCLIYIDDVVCFSKTFSEHVERVTEILSRIQMVGMKLKPQKCSLFQAEVKFLGHVVNKDGVRPNPENTGKIKNWPVPKS VTEVRQFIGLASYYRRFIRNFAQIAQPMHQLLKKDKKFEWSSQCQESFENLKEMLMGPEIMSFPSDHGEYILDTDASDTS IGCVLSQVNDGRKFTIRTDHQALVWLFRTKDPKGRVARWIEIMSAFHFTIEYRPGNKHGNADALSRCENPLDCVCSEIDD LEELRCGPCKKCRKRYDSNYQIDKVRAINTRSKDNKKEGTYWKDLCGVDAAQMKQLQINDDNIGPVYKWKIEGTKPSKSD LQKCSPETRHYCLLWDSPQIKNEIMCKLYYHKDGLGVQEQIIVPLXSNYQIDKVRAINTRSKDNKKEGHLGSKKTWQKTR TKFYWYEMREEVNLYVAQCHACAVSKMPNKQPRATLGQMLVSAPMDRVCVDLLGPLPVTPRRNRYVLVVMDYFTKWVEVY PIEDQSAKACADRIIDFICRFGCPSSLHSDQVKSFENEIFKELCNLFQMKKTRSSPRNPKCNGMVERFNKTLISMIRAFL NDEDEN |
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