Gene
| Gene Model ID | pfu_aug2.0_4387.1_25933 |
|---|---|
| Locus | scaffold4387.1 : 1 ... 14435 : - |
| To GenomeBrowser | scaffold4387.1:1..14435 |
| Genes list of scaffold | scaffold4387.1 |
| Synonym | pfu_aug1.0_3944.1_37748 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4387.1_25933.t1 | 1 | 1 | Flavodoxin_1 | 19 | 104 | 1.6e-20 | 73.5 | 6.6e-24 | 3.2e-20 | 72.5 |
| pfu_aug2.0_4387.1_25933.t1 | 1 | 1 | FAD_binding_1 | 315 | 532 | 1.09301e-43 | 149.2 | 0.0 | 1.69557e-43 | 148.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4387.1_25933.t1 | gi|585715577|ref|XP_002741834.2| | PREDICTED: methionine synthase reductase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_4387.1_25933.t1 | gi|676435916|ref|XP_009047712.1| | hypothetical protein LOTGIDRAFT_225295 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4387.1_25933.t1 | gi|524875488|ref|XP_005094471.1| | PREDICTED: methionine synthase reductase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4387.1_25933.t1 | gi|390347070|ref|XP_787027.3| | PREDICTED: methionine synthase reductase isoform X3 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_4387.1_25933.t1 | gi|554802404|ref|XP_005912188.1| | PREDICTED: methionine synthase reductase-like isoform X2 [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4387.1_25933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4387.1_25933.t1 atgcaacttccggaaactttgctttcgtttcgtaaacacagtggtgtctttgtgttggagaatgaatcatgtgttgttat agtgacatctacaacgggggacggtgaaccgcctgactccgccctcaagtttgtacggagactcaagaagaaatctcttc ctgatactcacttacaaaatgtcaactatgcattactgggtcttggggattcaaactacactaacttctgtaattgtggt aaaacattggacagacggttggaggagttaggggccaaaaggttctataactctggatggggcgatgatgctgttggtga aaaaccctcaaggacagacaacccatgtcaaatttcaagttctacctcacattgtgatgatattggtgaccaaacgactt ctacaaagctattattgaaaagtggtgtaaaggaaagcaatacaaggtctgtatcaaatggtacgacaaacggaaacgaa aatggctgtgatttgaacgttaatgggacagagcaggatgcaatattacaagtaaacgggaatacaaactccaacgctga tgatagcttaattagtgatattttaccaagcaatcaacaaaacggcacttcaaatggtgtgactagtactattattgata gttcctcagcagccaaagatcaaaatgtgaatgcagcaaaagtagagtcattacaaacggatgatactcgggcaacatct aatgggacagatagtgtgaacaagattgataaagatgcagaggtcaccattacaacatcagatttacgaacttcggtacc gcccttatgtgatgccgccttgtctgttccagttttaccacagcccttcttgaaattgagtttttctccagatgatacag tggatcttcttagtcttccataccaaaacggatccaacttaccgtctgctgccaccccaatcaccatggtaacagtgtcg tctgctcaggtcatgacatcgtcagacagcgtcaagaaaactctgtgtctgaggatgaaaatggaggatgagaatgtagt caaataccagccaggtgattccatatctatatgctgccagaatgatgatcaagaggtggatcagcttctacttagactag gacagtccaatcaagcagacattccgtatgagctaagtttgatctccgacacaaaaaagaaaaatgcagctctcccgccc cacctccctccaaaagccacgttgagacacatgtttacacactgtgtggacattagggaaccccctaaaaaggcattcct gagagctttaattgactgtaccacagatcctgttgagtctcgtagactacaggagttatgtagtaaacaaggcgcgacag attacaacaaatacatccgggaagctggtgtctccatattggaccttctttctgcattcccttcatgctgtccctctgta gacagaattatggagtttctacccagattacagcccagaccctactctgtatgcagctcaccgctgacagaacctacaat cttggaggtagtattcaatgttgtagagatttcaaaggaaagtgggaggagcttccatcgtcaaggggtgtgtactggaa tgattgacaggatgactcaaggcttgcagactgagtacaaatctcttctatcacctttagatagtatagaaagactgaaa attgatgatgtaccaagaattcagtttaacgtggttgtttcacttggggaaaatttcatgactaaaacatcaacacgtta tgcgtgggggaaagttttgtga |
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Protein
| Protein ID | pfu_aug2.0_4387.1_25933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4387.1_25933.t1 MQLPETLLSFRKHSGVFVLENESCVVIVTSTTGDGEPPDSALKFVRRLKKKSLPDTHLQNVNYALLGLGDSNYTNFCNCG KTLDRRLEELGAKRFYNSGWGDDAVGEKPSRTDNPCQISSSTSHCDDIGDQTTSTKLLLKSGVKESNTRSVSNGTTNGNE NGCDLNVNGTEQDAILQVNGNTNSNADDSLISDILPSNQQNGTSNGVTSTIIDSSSAAKDQNVNAAKVESLQTDDTRATS NGTDSVNKIDKDAEVTITTSDLRTSVPPLCDAALSVPVLPQPFLKLSFSPDDTVDLLSLPYQNGSNLPSAATPITMVTVS SAQVMTSSDSVKKTLCLRMKMEDENVVKYQPGDSISICCQNDDQEVDQLLLRLGQSNQADIPYELSLISDTKKKNAALPP HLPPKATLRHMFTHCVDIREPPKKAFLRALIDCTTDPVESRRLQELCSKQGATDYNKYIREAGVSILDLLSAFPSCCPSV DRIMEFLPRLQPRPYSVCSSPLTEPTILEVVFNVVEISKESGRSFHRQGVCTGMIDRMTQGLQTEYKSLLSPLDSIERLK IDDVPRIQFNVVVSLGENFMTKTSTRYAWGKVL |
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