Gene
| Gene Model ID | pfu_aug2.0_439.1_30755 |
|---|---|
| Locus | scaffold439.1 : 1 ... 26429 : + |
| To GenomeBrowser | scaffold439.1:1..26429 |
| Genes list of scaffold | scaffold439.1 |
| Synonym | pfu_aug1.0_37598.1_34028 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_439.1_30755.t1 | 1 | 1 | OTU | 55 | 149 | 5.3e-13 | 49.6 | 1.4e-16 | 1.1e-12 | 48.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_439.1_30755.t1 | gi|514726083|ref|XP_005015078.1| | PREDICTED: LOW QUALITY PROTEIN: OTU domain-containing protein 3, partial [Anas platyrhynchos] | 4.0e-09 |
| pfu_aug2.0_439.1_30755.t1 | gi|546317069|ref|XP_005716334.1| | unnamed protein product [Chondrus crispus] | 3.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_439.1_30755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30755.t1 aggcacttgatacaacaattgtagaccggacagaagcagctgcaatcggtacatcccatacgcaagaaacagattctgac attagtcataaattcagtaaattggaagtatctggatctaggcagcaagaaaatacactaggttccttcagaagacaaag tatacctggagatggtaactgtttctttagggcagtggcagatcagttaaaccatcgtgatttgcctcttgggggtgttg atcatatagctttgagggaaatggcatgcacttatttgtcaaacctatcagaggaagataaaaacaaacattgggatgga tttttggatggaggaagcttacaggaatacattctcaacatgacgcgtgataaaacatatgcggacaacataataattca agccttggcagatcggttatctcttcatattgttattcatacagatgtgtgggaacaccgtattacacctaggtcaagaa atggagattgtcccaggattcatcttttacttacacaatttggaagaaatgaaagcccgttagatcactatgacagttta catgagaatacagatgaaggacaaaccaataacatccaggaattggaaatggagtcttacaatattgttgaggcttatga tgatcaacctttagaaaatccggaaaagccccaaaacaagagagaacaagaggaaccatataagaagcatccagatatgc tgtcagattcaaaacttccaacccaggtggcccagaattctgactctaaaagtgactctgcagcaacaacacatgctgac actaaatcttattttaagattgaaagtgtgaagagagggactgacttcatgaatcacaaaactcaagacgatacaaagag agtgaaaaattctggaaaagtgttgccgccaagggatattgactcacagaaacggagaagggattctacaaaagtattgc caccaacaaggagggataaagttgatggagtgagtcttgaagacgatttggaagatgaagaagatttgaaacatgaagaa gatctggaagatacatcaactaaagctaaatcaagtaataagattcctatctcaacatatattatgcctcttccattatg gtcagcaaaactgaaacagaggaatatcaaaattgaacacatttaa |
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Protein
| Protein ID | pfu_aug2.0_439.1_30755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30755.t1 ALDTTIVDRTEAAAIGTSHTQETDSDISHKFSKLEVSGSRQQENTLGSFRRQSIPGDGNCFFRAVADQLNHRDLPLGGVD HIALREMACTYLSNLSEEDKNKHWDGFLDGGSLQEYILNMTRDKTYADNIIIQALADRLSLHIVIHTDVWEHRITPRSRN GDCPRIHLLLTQFGRNESPLDHYDSLHENTDEGQTNNIQELEMESYNIVEAYDDQPLENPEKPQNKREQEEPYKKHPDML SDSKLPTQVAQNSDSKSDSAATTHADTKSYFKIESVKRGTDFMNHKTQDDTKRVKNSGKVLPPRDIDSQKRRRDSTKVLP PTRRDKVDGVSLEDDLEDEEDLKHEEDLEDTSTKAKSSNKIPISTYIMPLPLWSAKLKQRNIKIEHI |
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