Gene
| Gene Model ID | pfu_aug2.0_439.1_30762 |
|---|---|
| Locus | scaffold439.1 : 110416 ... 118912 : + |
| To GenomeBrowser | scaffold439.1:110416..118912 |
| Genes list of scaffold | scaffold439.1 |
| Synonym | pfu_aug1.0_109570.1_49639 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_439.1_30762.t1 | 2 | 1 | Ldh_2 | 3 | 121 | 0.0 | 249.6 | 2.7e-33 | 4.0e-29 | 101.4 |
| pfu_aug2.0_439.1_30762.t1 | 2 | 2 | Ldh_2 | 121 | 296 | 0.0 | 249.6 | 0.0 | 4.40008e-43 | 147.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_439.1_30762.t1 | gi|241997878|ref|XP_002433582.1| | malate dehydrogenase, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_439.1_30762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30762.t1 atgttagcagtaggggcggatcaagcacattcagaggtgttagccgatgtacttgtcacagctgattacaggggccacta cagtcacggtttgaacagactagacgtatactacaaagaagtaaagtatggtacatgtaaaggaggaggggtggagccaa ccatcgtaaagcagacagctgccacgggcctggtggagggacataatttacttggtccggtggttggtaaatttgctgta gatctagctgtagagaaagccaagaattctggtattggactagttacagccagaggatctaatcattacggtattgcggg atggtactcattacgagcactcaaggagaatcttatacatgtaattggttccaacccgatatgttgtgcagctccaggga aagatggagatagcttcgtattagacatggcaaccacctgcgtagctatgggaaaaattgaggttcaaggccggaagaat ttacctctacctcatggctgggcagtggacgagagtggaaaggaaacactgaatccatcagaagttacaggactactccc cctcggtggtcttgaagaaagcagtggatacaaagggtatggattagctctaatggttgaggttctgtgtggtatactga gcggctcagcgattggtccattcatacggacgtggaaatctttcgacaaggaggcaaatttaggacactgtttcattgta attgatccgaagtgttttgaggacgaatttgaagaaagactaagtacactgatggattactgtagaagtctagatccagt tgatccagagaagccagtattgattccaggcgatccagagagaaaccacatagctaaatgtgatagactaggtggaatac cctaccatccaaatcaaatcaaatacttgatggacattgccaaagaacttggggttcagccgctcaaagcattataa |
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Protein
| Protein ID | pfu_aug2.0_439.1_30762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30762.t1 MLAVGADQAHSEVLADVLVTADYRGHYSHGLNRLDVYYKEVKYGTCKGGGVEPTIVKQTAATGLVEGHNLLGPVVGKFAV DLAVEKAKNSGIGLVTARGSNHYGIAGWYSLRALKENLIHVIGSNPICCAAPGKDGDSFVLDMATTCVAMGKIEVQGRKN LPLPHGWAVDESGKETLNPSEVTGLLPLGGLEESSGYKGYGLALMVEVLCGILSGSAIGPFIRTWKSFDKEANLGHCFIV IDPKCFEDEFEERLSTLMDYCRSLDPVDPEKPVLIPGDPERNHIAKCDRLGGIPYHPNQIKYLMDIAKELGVQPLKAL |
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