Gene
| Gene Model ID | pfu_aug2.0_439.1_30765 |
|---|---|
| Locus | scaffold439.1 : 163126 ... 172242 : + |
| To GenomeBrowser | scaffold439.1:163126..172242 |
| Genes list of scaffold | scaffold439.1 |
| Synonym | pfu_aug1.0_1590.1_08033 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_439.1_30765.t1 | 1 | 1 | GFO_IDH_MocA | 6 | 128 | 4.5e-24 | 85.2 | 4.4e-27 | 8.1e-24 | 84.4 |
| pfu_aug2.0_439.1_30765.t1 | 1 | 1 | GFO_IDH_MocA_C | 145 | 247 | 6.5e-12 | 45.2 | 9.7e-15 | 1.8e-11 | 43.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_439.1_30765.t1 | gi|391337666|ref|XP_003743187.1| | PREDICTED: uncharacterized oxidoreductase YrbE-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_439.1_30765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30765.t1 atgacaaaacatgtggttgctatttttggcatcgggagaataggccaagttcaccttaagaacttggtcaactgcaaccg agttgtagtgaaatggatagttgatgcaggatgcatgaaggaaaaggcacatggactaatcgaccagctgagattgcaag gagagacaacttttgttgaaatagaaaaatctgacaaggtcttcgcaaatgatgaagtggaagccgtctttgtatgtgtt ccgacaagtttccatgcggagattgcaataaaagcattaaatgcaggaaaacatgtgttctgcgagaaacccctggcagc aacgttacaggaagtcaaagaatgttacgagactgccaagaaaaacaataaaaccttaatgtgtgccgttaacaggcgct ttgatccacagttcaatggtatttatcagatgaaaaacgagggaaaacttggtaaaatacggatcatcaaaatgacagga agagatatggggaataccgaagagtactataaaaataatccaggaggcatattcatggacatgggtatccatgacgtaga ttatatatgttggttagcaggagaaaaaccatcatcagtctacgcaaccggatgtagatgtgggaccagtgcggaaatgt atgcgcgcgtcggagagtatgacacggccagtgccatctttaccttcccatcaggcatctcggctcatctcgaattgtca cgtgaatgcgggtacggatacggacaaaatgttgaggtacttggcacaaagagtctcatcaggtctcatgacttaaaaga gaccgaactggagagggtaacaaaggaaggccaccacttagatgctgttgtagagtgcttcacgacgcgatttgagaaga gctttcaggctgaaatccatcatttccttgacgtgattgagggaaaatgtgagtgccttgtatcgcctgaaagttatatc atatctaccgaagtagtgatagcactaacggaatcactggacaatggagatgttatcaaattctag |
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Protein
| Protein ID | pfu_aug2.0_439.1_30765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_439.1_30765.t1 MTKHVVAIFGIGRIGQVHLKNLVNCNRVVVKWIVDAGCMKEKAHGLIDQLRLQGETTFVEIEKSDKVFANDEVEAVFVCV PTSFHAEIAIKALNAGKHVFCEKPLAATLQEVKECYETAKKNNKTLMCAVNRRFDPQFNGIYQMKNEGKLGKIRIIKMTG RDMGNTEEYYKNNPGGIFMDMGIHDVDYICWLAGEKPSSVYATGCRCGTSAEMYARVGEYDTASAIFTFPSGISAHLELS RECGYGYGQNVEVLGTKSLIRSHDLKETELERVTKEGHHLDAVVECFTTRFEKSFQAEIHHFLDVIEGKCECLVSPESYI ISTEVVIALTESLDNGDVIKF |
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