Gene
| Gene Model ID | pfu_aug2.0_44.1_13458 |
|---|---|
| Locus | scaffold44.1 : 11966 ... 66323 : + |
| To GenomeBrowser | scaffold44.1:11966..66323 |
| Genes list of scaffold | scaffold44.1 |
| Synonym | pfu_aug1.0_793.1_00495 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_44.1_13458.t1 | 2 | 1 | AAA_12 | 414 | 448 | 0.0 | 167.4 | 0.13 | 160.0 | 1.5 |
| pfu_aug2.0_44.1_13458.t1 | 3 | 1 | AAA_11 | 502 | 554 | 7.2e-37 | 127.2 | 2.0 | 2500.0 | -2.3 |
| pfu_aug2.0_44.1_13458.t1 | 2 | 1 | RNB | 945 | 1302 | 1.6e-39 | 136.1 | 1.99965e-42 | 2.5e-39 | 135.4 |
| pfu_aug2.0_44.1_13458.t1 | 2 | 2 | RNB | 1637 | 1666 | 1.6e-39 | 136.1 | 4.2 | 5200.0 | -3.7 |
| pfu_aug2.0_44.1_13458.t1 | 3 | 2 | AAA_11 | 1717 | 1963 | 7.2e-37 | 127.2 | 5.8e-40 | 7.2e-37 | 127.2 |
| pfu_aug2.0_44.1_13458.t1 | 2 | 1 | AAA_30 | 1717 | 1756 | 8.3e-11 | 41.8 | 6.1e-07 | 0.00075 | 19.1 |
| pfu_aug2.0_44.1_13458.t1 | 1 | 1 | AAA_19 | 1722 | 1797 | 1.1e-09 | 37.9 | 2.7e-12 | 3.4e-09 | 36.3 |
| pfu_aug2.0_44.1_13458.t1 | 1 | 1 | DUF2075 | 1732 | 2186 | 3.7e-07 | 29.4 | 3.0e-08 | 3.7e-05 | 22.8 |
| pfu_aug2.0_44.1_13458.t1 | 2 | 2 | AAA_30 | 1924 | 1962 | 8.3e-11 | 41.8 | 3.2e-07 | 0.0004 | 20.0 |
| pfu_aug2.0_44.1_13458.t1 | 2 | 2 | AAA_12 | 1973 | 2190 | 0.0 | 167.4 | 0.0 | 0.0 | 162.6 |
| pfu_aug2.0_44.1_13458.t1 | 3 | 3 | AAA_11 | 1984 | 2114 | 7.2e-37 | 127.2 | 1.6 | 2000.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_44.1_13458.t1 | gi|514782370|ref|XP_005028069.1| | PREDICTED: helicase with zinc finger domain 2 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_44.1_13458.t1 | gi|557277320|ref|XP_006021764.1| | PREDICTED: helicase with zinc finger domain 2 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_44.1_13458.t1 | gi|727010940|ref|XP_010395224.1| | PREDICTED: helicase with zinc finger domain 2 isoform X1 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_44.1_13458.t1 | gi|701295563|ref|XP_010007962.1| | PREDICTED: helicase with zinc finger domain 2 [Nestor notabilis] | 0.0 |
| pfu_aug2.0_44.1_13458.t1 | gi|727010942|ref|XP_010395226.1| | PREDICTED: helicase with zinc finger domain 2 isoform X2 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_44.1_13458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13458.t1 atggaaagtgaagctgaaaaggaaattaaaaaactgcactataaactgttgtatgagacaattgctatcgagcatctcca ttatgagaacagaagtggtaagcccctagagcgatttaggagcaaatgcaagatatatttaacgtcagctataggaatat cttccaaaacatgctgcgaccttcttgaagaatgtgaaagagagggtattgtcagcaagggaaaatatgatatacttagg aaacttgtagaattcgatacaccattactgagtaaaatcagtgatgttgaacgagcgataaaactcatccaaaagaaagc agggagtcttaaaagccgaaaacggaaagcacccggaagtgaggaggaccccaaatgcatagatgatctacttgtgagag tggatttttatgaccttattccggtggagaatgcggaatacgacgacgttgtgcggaaattagatacagtcactgaaatg ataactgaaatagcactggaacttattttgaatgacaatggtttgtatgaagaattcaatagatgtcacaaagacttcaa taaaaggaaagacgaatcagcaagaattcttagattattttattacatggaaaatgaggatactgctacaaagaaaggaa aagagattctaaaacttgcagaaagaggaagagaactcatacagaatgaccatgataaattcaaaattttcaaagagaac tggagtcattacaaccgtagattaaaagagcaacttgctttccatacatacttaacgaaaaagggtgcaaaagtcagaaa gcaattatttgcatctacttttctgtttctgttgtttgaatgtagagaaaaattggtggtttttatggatgaatacagga ggggcattctgcaaagggagctacaagacattttcatcacggaggactttctgagatgttttcacctgacttctgcgaaa attgatatttatatcgactccgcagattttgacagctacttgtcctgtttcgaagaccaggatttgcaagaggacgaaga taaaggcggctcaaaaagggttctacatttggctgaaagactagaagctgctgagcaaaacgtgaaagaggagagaaaga aagaggcattcagacaaggtagagagatactagaggatataaaaacgatgacaactttgtctcctggagaagagattgtt cgactaatgaacgtgttcagaaaggtgcagtcagatatattcatgataaagacattttatcaagggaaactaatggaagg agaatcgttccaaccgtctgacagtgtagccctttgggaagagctttattccaacaatccagatcctcagggtcagtttg agagcctgaagcaattgtgtattacagagtcgagacaatctaaggagaacgtcagccttctcttcctctgggctaaggct ttattttctctcggtcaaagtgacgaggcacttctgaaaatatcagaagcacaggagaaatatcagggcgccgaaagagt gtcattacaagaaatggaagcctttatgggagaaattaaaagtagagtagaggaacaaaatgaggaggaggtgaaacaaa cgagttctgaagaatcgtcagaggatgattcatgtgtaagaaaagagagtgaaagcgaagacagaacttcggaagatgac tctgatccttccaaaagcgatgaggaagagagtgttgaagtcgaggaagaagaatacttagaaaggaaaagcaatgtatc ctcgagggaatctgaatcagggttgagctcacccgcagatgataccgcttcctcatctagcgaaacttatgtgaagccaa ggaggattcccttacctgtagacgagggcgcggcttacactggaaaagactcttactcagataccgacagtggtgttgga cgtagtgtaccgtctgttacctcgtccgatgtggagtccgtatatagatatagaagacagcgcgaacgaatcaaggacga cgacgaaatcgattttgacgaatatttgaacggtattcaactgtcaaaatacgcagttgatagatttaagaaatcaaaga cagactttcgatttccttacaaggaacttgagaaagatgagaagaaattgcaaagcatgtgtcgaaatcccgagtttaaa cgatgtgttgtagaagtgaaaggtgcccatgaagctgtatgtaccgatctggatgattttgctgcaaaacacatcaatat atccggaagatcccgttgcggccgggttttcacaggtgatgaagtggttgttcatatcctagaaggaggggacattattc cgaggcttcagagaaaattagattctgatgtgtatggggaaatagttggctttctaagacgaaacaggcatcgaaatatc aaacaccctgtgtttctatgtgtattcgaccacacagatgatcaagtatcatcggttaggccaatttgtaaaacagtgcc gaaactgtttgttcgacacatgaaagaaacaaaaagaaatgaaattgaactttaccattacgataaaacgcatcaaacac taacgtttacagacacaaaatacataaattctaaagttcgacatacttttgtacttctagttgcatttgttcattgggaa gaggagatttatcccaaaggagtaatcctgcatttattcgaaagaggattttctttaaaacaagaattcgacatgctagc atttcaacatggaatcaaacagacgttttctgcaaacattactcaggcagtgaaagaaattcagtgtttgaaagtagcaa aagaatcaaaaggaaatgacgaggcaatagaggtgtttacaatcgttaaatcggaaaatgatattccatgtcatgccttc agttttcaaacaacagaaaatgggaagaaatatttgggtattcacataattgatgtttcgcgaattatagctgaagattc acctctggatgatgaagcatcgaaaaggggatgctcttttcaatcaaagacttacctatgtccaatgattccaggggaag ttgtgaatgacgtttgtaaatttaacgaggaatatgctgttccgactatctccgtcatctttgaagttgacactgaaaat gatagcataataggagatggagttatacagaaaaacgaaatgaaactatcctacatactatcatacaatgaagtacaaaa tattatagaatctgatggtggaaaatgccaatactgtgaaagtgaaaatcagtgtcatttgataaaaatgctaaatatcg caaataagttgagaaagggtcggttgggcggttctgcatttgctcattgtcttgaaatggaactcgatgatgatcaaata gatattgatgtagagaaacaccatgatgtaagggtaataacacaggagtttttacaccttatcaaccattatgttgcatg ccatttacaaagaaagggaaagatatttcctattctgcaccaagcccgtccagatgaaaacctgaccagaaactggaagt cagcttttgagccattgtggaactttcttatttcgcttcaggattattcattaggcgctagggataaagtatctattgaa aaagaagaattagataaaattcggtacacaaagataattggggtccaactttcgttgtgggatcaaataaaggaatatgt tggacaatctaacagtcaaaaattgaaagagctcatgtttaccgacgaacttcatccaactttagctattgcaaagcagc aatggctagattttcagtcgaaagagacaataagtaccagttccagagtaaagagtactgtgcattattccctgcatcta ccaatatattgtagtattaccagaccgcttcattgttactcagacctcgttacacaaagaattttaggttcaacgtcata ttctgttcaagagatggagggtattgtatctcaagcaaacgtacatatggcaaaattgaatctattcaacaaagaggcaa agaaaatgcaaatttcaagcagaatctcccgaaggcatttatctgtaactgcttttgtctacgctcttgataaatccgga atcgatataataattcctgggtttgaagatgttggagacggcagtatatttcggataaatatttgtgatttacaacctag cggggaagtgattaaagagaagaacacggaaatcggtaaggaacatctcatagtcaagtgggaaaaacgactttattctc tggagaaaaaaaccgggaaggttgaaacaaattcagtcatccatggcattaatcctcaccagaaaagtcaatttgtgcgt ctttctatgtggcgatccttactgaaaatgctaatggaggaaaaccttcggttccttggagatatccaaaacgtggccaa tgtaagagatttagccgatgaatctcgaaagacaacttatgatcatatccgtgacccggtgtcctgctttgagctttgtc cggatagtaaagttaagacaacgtacaagtctttgacagaatacagcaacacttggatacccatcctcctaatggaagca gcgacaactgcacttgccgatgattcaatcactattaaccacgtaactgttcattttgatggtaaggggggcttcttctc tatagacaaaggcttctgcgaaatgcgagatatcgatttaactagtataccacttggattttttcaatgtcctgacccaa atgacgtctatgtgacatcaagagctgactacctttgcatccgttgctccgctcgagagtttgagactgaaaaatatatt ctaccaggacataacttggcattccgcgttttacatgcaaagataagcgacataacatttgaagaagagaaaaggcaata caaagttgttttccatctccatagcaataatctagtgctgaatgaaaaggaaagaaaaaccgttaaaagttgcagtattg aaattctgccaaaaggagaggtgataaggagaactgaagtcatccttaaacgtcttgacttggcaggaagacttccaaga aatatttctatcaggaaacttgagaaaattccaaaattggatgaagaccacaggacagtggctgaaaatataggctacga tatcatagaggaaggtgttaccctgagcaacaccaaacagagggaggccatccagaaggctttacattcgtcatttagtt tgattcaagggccaccaggaactggaaaaactttcacagccgtgaagttagtatatttgttctgcaaaatcaatagatgt ctttatgaaatgaaaggagagaagtcaatactagtgttctgtggaccatccaataagtcagttgacgtggtagctaaagc caccttggaaagtttgggaagtgttacatttgcaccaaaaatctgtagactgtacggaaaactaattgaacattcagtgt atccgattcctggacgatctacaaaaagtaaaaggcatgttgagcgacatgcagacgaggcattgaaggatatatctgtt cacaatttgatcagaaaggagggtaacctctttgcggaaacgcttaaagaattcgatgagttttttagtgcaatttcaga agaagatctacaacgtaaagaaacttttcgcaagtacctgaggaagatcaaggaatatcattcgcacgtaacggaagcaa cactggatgaaatccaaaaatttgaagcaatattttgcactactgcagttgctacaaagggcctgctatttcagaagaaa agagtgttccaaataattatagacgaggcaggaatgtgtaccgaaccagaaaccatagctgcaatagtagcaactggtgc taagcaagtcgttttgataggagatcatcaacaattacggcctgttcttagtaatctcgatgctaaggcaaaaggacttg aacaatccttatttgagaattatgcgagactggcagacgacaacgattcacggggaaatgttcccttcaccaggctaact acacaatacagaatgcatgaaaagatctgcgagtttccatccaagcagttttacagtggtgagctgaaaacgaatgaaaa atctgtctccggtcctccgcctcatatagcagaaatctggcctgtaagttcctcaccaatagtgttttgccatgtggagg ggacagaggagaaacttactcattccatggaggagggaaaccagatgtcacgaaagaacatagaagaggtggagcaagta gttcgagtttacaaacgattgatcaaactgggagttgatccatcggagatcaatgttatgtcacagtacaatgctcaatg ctcattgatgaaaaagaaactagccaatgaaaactgtaccagtgctcatgtaagcacagtttttcaaagtcaaggaggcg aatgggattatgttatatttagtacggtatgctcattaccagaatacaggatagagccacagccaaccctcgggtggcag aaagctaatttaggttttattacagacgagcatcagatcaatgtggcattgacaagagcaaagcgagggcttgtcataat aggtaacaaacacttactgaaatgtgacggcaaagtgtggaagaagttaattaaatattatgaacaggagaaatgtatcg tggatgcacggctgtttccgaaaccaaagcggaagaaacgaaaggcgtcgaccagagtcgatcaaaacgagggagagtgg actaaagcttaa |
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Protein
| Protein ID | pfu_aug2.0_44.1_13458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13458.t1 MESEAEKEIKKLHYKLLYETIAIEHLHYENRSGKPLERFRSKCKIYLTSAIGISSKTCCDLLEECEREGIVSKGKYDILR KLVEFDTPLLSKISDVERAIKLIQKKAGSLKSRKRKAPGSEEDPKCIDDLLVRVDFYDLIPVENAEYDDVVRKLDTVTEM ITEIALELILNDNGLYEEFNRCHKDFNKRKDESARILRLFYYMENEDTATKKGKEILKLAERGRELIQNDHDKFKIFKEN WSHYNRRLKEQLAFHTYLTKKGAKVRKQLFASTFLFLLFECREKLVVFMDEYRRGILQRELQDIFITEDFLRCFHLTSAK IDIYIDSADFDSYLSCFEDQDLQEDEDKGGSKRVLHLAERLEAAEQNVKEERKKEAFRQGREILEDIKTMTTLSPGEEIV RLMNVFRKVQSDIFMIKTFYQGKLMEGESFQPSDSVALWEELYSNNPDPQGQFESLKQLCITESRQSKENVSLLFLWAKA LFSLGQSDEALLKISEAQEKYQGAERVSLQEMEAFMGEIKSRVEEQNEEEVKQTSSEESSEDDSCVRKESESEDRTSEDD SDPSKSDEEESVEVEEEEYLERKSNVSSRESESGLSSPADDTASSSSETYVKPRRIPLPVDEGAAYTGKDSYSDTDSGVG RSVPSVTSSDVESVYRYRRQRERIKDDDEIDFDEYLNGIQLSKYAVDRFKKSKTDFRFPYKELEKDEKKLQSMCRNPEFK RCVVEVKGAHEAVCTDLDDFAAKHINISGRSRCGRVFTGDEVVVHILEGGDIIPRLQRKLDSDVYGEIVGFLRRNRHRNI KHPVFLCVFDHTDDQVSSVRPICKTVPKLFVRHMKETKRNEIELYHYDKTHQTLTFTDTKYINSKVRHTFVLLVAFVHWE EEIYPKGVILHLFERGFSLKQEFDMLAFQHGIKQTFSANITQAVKEIQCLKVAKESKGNDEAIEVFTIVKSENDIPCHAF SFQTTENGKKYLGIHIIDVSRIIAEDSPLDDEASKRGCSFQSKTYLCPMIPGEVVNDVCKFNEEYAVPTISVIFEVDTEN DSIIGDGVIQKNEMKLSYILSYNEVQNIIESDGGKCQYCESENQCHLIKMLNIANKLRKGRLGGSAFAHCLEMELDDDQI DIDVEKHHDVRVITQEFLHLINHYVACHLQRKGKIFPILHQARPDENLTRNWKSAFEPLWNFLISLQDYSLGARDKVSIE KEELDKIRYTKIIGVQLSLWDQIKEYVGQSNSQKLKELMFTDELHPTLAIAKQQWLDFQSKETISTSSRVKSTVHYSLHL PIYCSITRPLHCYSDLVTQRILGSTSYSVQEMEGIVSQANVHMAKLNLFNKEAKKMQISSRISRRHLSVTAFVYALDKSG IDIIIPGFEDVGDGSIFRINICDLQPSGEVIKEKNTEIGKEHLIVKWEKRLYSLEKKTGKVETNSVIHGINPHQKSQFVR LSMWRSLLKMLMEENLRFLGDIQNVANVRDLADESRKTTYDHIRDPVSCFELCPDSKVKTTYKSLTEYSNTWIPILLMEA ATTALADDSITINHVTVHFDGKGGFFSIDKGFCEMRDIDLTSIPLGFFQCPDPNDVYVTSRADYLCIRCSAREFETEKYI LPGHNLAFRVLHAKISDITFEEEKRQYKVVFHLHSNNLVLNEKERKTVKSCSIEILPKGEVIRRTEVILKRLDLAGRLPR NISIRKLEKIPKLDEDHRTVAENIGYDIIEEGVTLSNTKQREAIQKALHSSFSLIQGPPGTGKTFTAVKLVYLFCKINRC LYEMKGEKSILVFCGPSNKSVDVVAKATLESLGSVTFAPKICRLYGKLIEHSVYPIPGRSTKSKRHVERHADEALKDISV HNLIRKEGNLFAETLKEFDEFFSAISEEDLQRKETFRKYLRKIKEYHSHVTEATLDEIQKFEAIFCTTAVATKGLLFQKK RVFQIIIDEAGMCTEPETIAAIVATGAKQVVLIGDHQQLRPVLSNLDAKAKGLEQSLFENYARLADDNDSRGNVPFTRLT TQYRMHEKICEFPSKQFYSGELKTNEKSVSGPPPHIAEIWPVSSSPIVFCHVEGTEEKLTHSMEEGNQMSRKNIEEVEQV VRVYKRLIKLGVDPSEINVMSQYNAQCSLMKKKLANENCTSAHVSTVFQSQGGEWDYVIFSTVCSLPEYRIEPQPTLGWQ KANLGFITDEHQINVALTRAKRGLVIIGNKHLLKCDGKVWKKLIKYYEQEKCIVDARLFPKPKRKKRKASTRVDQNEGEW TKA |
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