Gene
| Gene Model ID | pfu_aug2.0_44.1_13469 |
|---|---|
| Locus | scaffold44.1 : 272120 ... 282958 : + |
| To GenomeBrowser | scaffold44.1:272120..282958 |
| Genes list of scaffold | scaffold44.1 |
| Synonym | pfu_aug1.0_1343.1_36967 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta-hexosaminidase subunit beta | GO:0019953 GO:0044237 GO:0044238 GO:0044707 GO:0044763 GO:0044767 GO:0048856 GO:0065007 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_44.1_13469.t1 | 1 | 1 | Glycohydro_20b2 | 112 | 246 | 3.0e-21 | 76.3 | 1.7e-24 | 6.2e-21 | 75.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_44.1_13469.t1 | gi|524873104|ref|XP_005093305.1| | PREDICTED: uncharacterized protein LOC101855238 [Aplysia californica] | 1.0e-38 |
| pfu_aug2.0_44.1_13469.t1 | gi|478492476|ref|XP_004420596.1| | PREDICTED: beta-hexosaminidase subunit beta [Ceratotherium simum simum] | 1.0e-29 |
| pfu_aug2.0_44.1_13469.t1 | gi|388454685|ref|NP_001253386.1| | beta-hexosaminidase subunit beta [Macaca mulatta] | 2.0e-29 |
| pfu_aug2.0_44.1_13469.t1 | gi|724797574|ref|XP_010361610.1| | PREDICTED: beta-hexosaminidase subunit beta [Rhinopithecus roxellana] | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_44.1_13469.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13469.t1 atgaggattctgcaatgtatcctgctgatagtaactttcatgtgttgtttttgcacttccggaagaaagaagcaaattgt tcgccataataaaatggacgacgatatgaaaattgtggaaatgcatgcatctaataaagaagaagtggagaaaaataaaa aggttgccaaaatggtcgccgaacaagaaagaaaaaaaccaaagcggaaattaattcgaccaacgatgtcttctgtcgac atcggttgggactacagcgattttgctatgaaattcgcagaggatagaatgaaactgaaaataaggcgtagtccgactgc aacagttgggaaaccctggcccctaccgcaagaatatagcacaggcgataaactgtttaaaattgatctcaaacaatttt cgatagacgccagtaaagtttggtgtgaaataatcgagaaagcaatagacaggtatcgaaaaatactttatatggcagca gggcagtttgcaagtgataatatggaaccgcttggtaaattcggactacatggcgtgatggaagagaatattacgagaaa gattgaggaggccatggaaatgaaatttcttactatatctatagacacaaattgttcatacatcccggacatatcatctg atgaatcgtataccttactagtcaagccaattggggcatttatcaaagcaaacgaagtttggggtgccttacggggttta gagacctttagccagttgattatccataaaggtggacagtactatatcccagagacgacaatacttgattttccacgttt tccccacagaggtgttcttatagactcatcccgtcactacatgagcaaaaacgtgatatttgatgtcatgttcgttgaaa atgaggattcattaaccaatgcaaatgatgccgctgatggagatagatgtactggatctaatgatagatatgagtttgtg aatgacgaaaaagttaaagaacctttagcctctacagaaagttag |
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Protein
| Protein ID | pfu_aug2.0_44.1_13469.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13469.t1 MRILQCILLIVTFMCCFCTSGRKKQIVRHNKMDDDMKIVEMHASNKEEVEKNKKVAKMVAEQERKKPKRKLIRPTMSSVD IGWDYSDFAMKFAEDRMKLKIRRSPTATVGKPWPLPQEYSTGDKLFKIDLKQFSIDASKVWCEIIEKAIDRYRKILYMAA GQFASDNMEPLGKFGLHGVMEENITRKIEEAMEMKFLTISIDTNCSYIPDISSDESYTLLVKPIGAFIKANEVWGALRGL ETFSQLIIHKGGQYYIPETTILDFPRFPHRGVLIDSSRHYMSKNVIFDVMFVENEDSLTNANDAADGDRCTGSNDRYEFV NDEKVKEPLASTES |
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