Gene
| Gene Model ID | pfu_aug2.0_44.1_13479 |
|---|---|
| Locus | scaffold44.1 : 515557 ... 524581 : + |
| To GenomeBrowser | scaffold44.1:515557..524581 |
| Genes list of scaffold | scaffold44.1 |
| Synonym | pfu_aug1.0_4424.1_30691 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta- -galactosyltransferase 7 isoform x2 | GO:0000030 GO:0009987 GO:0035250 GO:0035251 GO:0044699 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_44.1_13479.t1 | 1 | 1 | Glyco_transf_7N | 79 | 122 | 4.2e-08 | 32.6 | 9.3e-12 | 6.9e-08 | 31.9 |
| pfu_aug2.0_44.1_13479.t1 | 1 | 1 | Glyco_transf_7C | 144 | 181 | 4.5e-15 | 54.8 | 1.0e-18 | 7.4e-15 | 54.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_44.1_13479.t1 | gi|671033868|ref|XP_008707752.1| | PREDICTED: beta-1,4-galactosyltransferase 7 [Ursus maritimus] | 3.0e-39 |
| pfu_aug2.0_44.1_13479.t1 | gi|568983286|ref|XP_006517279.1| | PREDICTED: beta-1,4-galactosyltransferase 7 isoform X1 [Mus musculus] | 2.0e-37 |
| pfu_aug2.0_44.1_13479.t1 | gi|148709272|gb|EDL41218.1| | xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I), isoform CRA_b, partial [Mus musculus] | 2.0e-37 |
| pfu_aug2.0_44.1_13479.t1 | gi|545184230|ref|XP_005599251.1| | PREDICTED: beta-1,4-galactosyltransferase 7 isoform X4 [Equus caballus] | 8.0e-37 |
| pfu_aug2.0_44.1_13479.t1 | gi|557028369|ref|XP_006014219.1| | PREDICTED: beta-1,4-galactosyltransferase 7-like isoform X2 [Latimeria chalumnae] | 8.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_44.1_13479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13479.t1 atgaggagaactaaatgcttggctctcggaatctgttgttctctgatcataacattccttattgcactctacccgttaca acaagacggagaaccctgtagttgtgacaaggcactgcaactatgtggtgctgatctgcaacaattgtgtgcaagttttc atagtaacaaaagtactcacagtgaagaggtccgatcacagaaggatgtatttgaggacaacactgactggggaccacat aaaatagccatactagtgccattcagggataggctagaagaactcctgacatttgtgccatacatgcatgagtttttgaa caaacaaggcactagacatgaattctatatcattaatcaagctgattattttcgcccatctctattagcagtgtgtagat tttttttcaaatatttttttcaagtgcagaaaagatccttctgtaaaatggtaaatggtatgtcaaacaagtactggggt tggggtcgagaggatgatgaattctacgtcaggatgaaaatggcaggactaaagaaaacaagtaaattagacagaataac tggagtgactactgtaaaatacacactggatagacgttctgtactgagtatagatggcatcaaagttcacatgttgaatg tgttattagaatgtgatttgactcaaacttcatggtgcttgactcctatgatggcaaaggaatataaggagaaagagtac tacattttggtaccatga |
|
Protein
| Protein ID | pfu_aug2.0_44.1_13479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13479.t1 MRRTKCLALGICCSLIITFLIALYPLQQDGEPCSCDKALQLCGADLQQLCASFHSNKSTHSEEVRSQKDVFEDNTDWGPH KIAILVPFRDRLEELLTFVPYMHEFLNKQGTRHEFYIINQADYFRPSLLAVCRFFFKYFFQVQKRSFCKMVNGMSNKYWG WGREDDEFYVRMKMAGLKKTSKLDRITGVTTVKYTLDRRSVLSIDGIKVHMLNVLLECDLTQTSWCLTPMMAKEYKEKEY YILVP |
|