Gene
| Gene Model ID | pfu_aug2.0_44.1_13482 |
|---|---|
| Locus | scaffold44.1 : 549637 ... 556188 : + |
| To GenomeBrowser | scaffold44.1:549637..556188 |
| Genes list of scaffold | scaffold44.1 |
| Synonym | pfu_aug1.0_3906.1_59380 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein hmx | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_44.1_13482.t1 | 1 | 1 | Homeobox | 165 | 220 | 2.7e-22 | 78.1 | 1.6e-25 | 4.7e-22 | 77.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_44.1_13482.t1 | gi|195453290|ref|XP_002073723.1| | GK18982 [Drosophila willistoni] | 2.0e-27 |
| pfu_aug2.0_44.1_13482.t1 | gi|195158361|ref|XP_002020060.1| | GL13779 [Drosophila persimilis] | 3.0e-27 |
| pfu_aug2.0_44.1_13482.t1 | gi|390177112|ref|XP_003736279.1| | GA30058 [Drosophila pseudoobscura pseudoobscura] | 3.0e-27 |
| pfu_aug2.0_44.1_13482.t1 | gi|751775178|ref|XP_011214238.1| | PREDICTED: homeobox protein Hmx [Bactrocera dorsalis] | 6.0e-27 |
| pfu_aug2.0_44.1_13482.t1 | gi|291223907|ref|XP_002731951.1| | PREDICTED: homeobox protein HMX3-A-like [Saccoglossus kowalevskii] | 2.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_44.1_13482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13482.t1 atggctgactcatgtacagctagaagctcttctttttctattgccaatatcttatccgatgatgtcaagggagtcctcaa aaaacgtcgcaaagaagatgaaaccaatagaagagagcccgagcaagacaaaaaggctacactttcaccattttcagatg gtggccgtgctccatttttcccgccttaccactcatactatccggctctgattggccggctggacgggagagatagtcat tatccaatcacagccagcgatcccagaatttttgtacggcagataccagcgacatcatcgcctacacaaagaaacgatga cgtcacttgcaaaactaaagtgacggcaaactttgagtctgaacgtaatgattttgcgaaagattattctgaaaggatta caagtgattgcgaatcagacgatggcactgacgccaatgtttcattatcagtacccggtaataacaatgacagtaatgtt accaaagttaaaaagaagacaagaacggtgttttccagacaccaaattttctacttggaatcggctttcgatacaaaacg atatttgtcaagcaccgagagagcagaaattgcatcagctctaaatttaacagaaactcaagtcaaagtatggttccaaa atcgcagaaataaatggaagtcacaagtatccggatctgataacggtatccctacagagcgctatccgggaatgttacta ggttcacaatacccgctctctgttgcagcctcacaaagtgctctgcagttctacagacgtccaatgttttacttctga |
|
Protein
| Protein ID | pfu_aug2.0_44.1_13482.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_44.1_13482.t1 MADSCTARSSSFSIANILSDDVKGVLKKRRKEDETNRREPEQDKKATLSPFSDGGRAPFFPPYHSYYPALIGRLDGRDSH YPITASDPRIFVRQIPATSSPTQRNDDVTCKTKVTANFESERNDFAKDYSERITSDCESDDGTDANVSLSVPGNNNDSNV TKVKKKTRTVFSRHQIFYLESAFDTKRYLSSTERAEIASALNLTETQVKVWFQNRRNKWKSQVSGSDNGIPTERYPGMLL GSQYPLSVAASQSALQFYRRPMFYF |
|