Gene
| Gene Model ID | pfu_aug2.0_4404.1_15971 |
|---|---|
| Locus | scaffold4404.1 : 35327 ... 38155 : - |
| To GenomeBrowser | scaffold4404.1:35327..38155 |
| Genes list of scaffold | scaffold4404.1 |
| Synonym | pfu_aug1.0_6772.1_02298 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4404.1_15971.t1 | 2 | 1 | MACPF | 139 | 242 | 1.1e-16 | 61.1 | 3.4e-14 | 5.1e-10 | 39.4 |
| pfu_aug2.0_4404.1_15971.t1 | 2 | 2 | MACPF | 238 | 323 | 1.1e-16 | 61.1 | 1.4e-08 | 0.00021 | 21.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4404.1_15971.t1 | gi|156375144|ref|XP_001629942.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_4404.1_15971.t1 | gi|126333412|ref|XP_001377766.1| | PREDICTED: macrophage-expressed gene 1 protein [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_4404.1_15971.t1 | gi|395545494|ref|XP_003774636.1| | PREDICTED: macrophage-expressed gene 1 protein [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_4404.1_15971.t1 | gi|560985529|ref|XP_006214968.1| | PREDICTED: macrophage-expressed gene 1 protein [Vicugna pacos] | 0.0 |
| pfu_aug2.0_4404.1_15971.t1 | gi|743721617|ref|XP_010954645.1| | PREDICTED: macrophage-expressed gene 1 protein [Camelus bactrianus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4404.1_15971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4404.1_15971.t1 atgttacctgtgctctgtgctacatgtctcattatcaacgctttaaagggagtccttgttttggctgaagacgacgaagg tataattgcatatcggtaccctattggtgacattaagacatgtcttataaacccgttgttccagaagacacttcgctacc aggtattaccaggaatgggatgggacaatttagagaataaagatgccggcttactcgttgtttacaattactctcaatgt aaaaccacggatgatggaaagtatttgctacctgactccatcgtaactgtacctattaaaagaagttatctcgaatcata tgcagaaatgttcgaacattggtcaaattatacatccttgacgtcaagatccataaatatcggcggcgaagcggaaaagg gcacttttggaataagtggaaaaatttcaagtgaatctcagaatgtaaaaatgaagcaagtgagtgctaaatctgtaaca actagagtccaagcaaggtatgtacgatatgcagcaaaacttcaaccggataccccgctgagcccgactttcaaaaaacg ccttcataatattgcagcaaatattcaattgaacaagacggcaatggcgacgtatgagagtcaactgctcgtacgagatt tcggaactcacgttgtaaccagtgtagatgcaggcgcaatcatagctaaacttaccatggactatagccaggtaaccagt aaggagaatattgaacaatatcttggtaatcgcactcactcagaagttttctccttcggaggacccgtttacaaacccat tgatttctcattggaccaatgggcggaagaaatgggaaacgaactggtagctatagacaaggctggagatccaatatatt tcctaataactccccaaactcttcccgaattatcgccttccatactttacgatctcacagaatatgttaaaacggcagtg gaacattattataaatttaatctttacgagggctgcactaaggctgattcgccgtcattcagctttgttgcaaatgtaga tgatggaacgtgtgaaagttcgtttacaaactatacatttgggggtgtgtaccaaacctgccatcaaataggacttctga atcaggatcattgctctgctttgcaacaaaagaaccctcttactggtgatttttcgtgtcccgaaaactacgagtctgta ttaatccacaaagggcatcgtcttgctaggcaatcacggcggtcatgtagctatttcttatttataaaaatagaatgtag cgacaacttcgaatgggcgaaagtaatttacacatcatactggtgtatcgcacggggatccgttcaacaatactctggtt tccagttcggagggctatacacagacaaggttccgaatctccttacaggaagtaaaaattgtcctctcttcttctatccg ttgaaaatgggagtaaacctaaaaatatgtgtcagtgacgattttgaacttggtttccgatactccgtaccttttgccgg attcttcagctgtaaaacaggaaatcctttaatgacagaaaaggcttccatccgatcacaagatctaaaactcgcctact atctaaaaacccaaagcaattggccaaaaggatgtccaaacggttatagctctcatctcgccactgttgaaaatgattgt gaaataaattactgtgtcaaagcgcatgcgttctccagctatgggcttcctcctgttcgcaaaccgccgtttgtagatct tccatcggatgcgtatatagacaaggaaaccgagtatgattttgaaatcagtcacgactacagcacttggactagcactc catcagaaaatgacactgacactaaaggaaatgtcatagccattttattgttaatctgctgcggaataatcgttgtatca ttggtcttcatttcaatttcaatcggtatctgtcgtcgcagaggtagaaagttgaatgcaatgaaacaagagacaagaat gtctgaacgcctactaaccctgagaaacgaaagtagcggtcctacacacgactcgagtgcttaa |
|
Protein
| Protein ID | pfu_aug2.0_4404.1_15971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4404.1_15971.t1 MLPVLCATCLIINALKGVLVLAEDDEGIIAYRYPIGDIKTCLINPLFQKTLRYQVLPGMGWDNLENKDAGLLVVYNYSQC KTTDDGKYLLPDSIVTVPIKRSYLESYAEMFEHWSNYTSLTSRSINIGGEAEKGTFGISGKISSESQNVKMKQVSAKSVT TRVQARYVRYAAKLQPDTPLSPTFKKRLHNIAANIQLNKTAMATYESQLLVRDFGTHVVTSVDAGAIIAKLTMDYSQVTS KENIEQYLGNRTHSEVFSFGGPVYKPIDFSLDQWAEEMGNELVAIDKAGDPIYFLITPQTLPELSPSILYDLTEYVKTAV EHYYKFNLYEGCTKADSPSFSFVANVDDGTCESSFTNYTFGGVYQTCHQIGLLNQDHCSALQQKNPLTGDFSCPENYESV LIHKGHRLARQSRRSCSYFLFIKIECSDNFEWAKVIYTSYWCIARGSVQQYSGFQFGGLYTDKVPNLLTGSKNCPLFFYP LKMGVNLKICVSDDFELGFRYSVPFAGFFSCKTGNPLMTEKASIRSQDLKLAYYLKTQSNWPKGCPNGYSSHLATVENDC EINYCVKAHAFSSYGLPPVRKPPFVDLPSDAYIDKETEYDFEISHDYSTWTSTPSENDTDTKGNVIAILLLICCGIIVVS LVFISISIGICRRRGRKLNAMKQETRMSERLLTLRNESSGPTHDSSA |
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