Gene
| Gene Model ID | pfu_aug2.0_441.1_04174 |
|---|---|
| Locus | scaffold441.1 : 55610 ... 68775 : - |
| To GenomeBrowser | scaffold441.1:55610..68775 |
| Genes list of scaffold | scaffold441.1 |
| Synonym | pfu_aug1.0_11053.1_53648 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_441.1_04174.t1 | 2 | 1 | Sushi | 137 | 169 | 3.3e-08 | 33.7 | 4.7e-07 | 0.0014 | 18.9 |
| pfu_aug2.0_441.1_04174.t1 | 2 | 2 | Sushi | 196 | 229 | 3.3e-08 | 33.7 | 4.9e-07 | 0.0015 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_441.1_04174.t1 | gi|390332551|ref|XP_796578.3| | 4.0e-19 | |
| pfu_aug2.0_441.1_04174.t1 | gi|390360628|ref|XP_003729734.1| | 4.0e-19 | |
| pfu_aug2.0_441.1_04174.t1 | gi|291222345|ref|XP_002731178.1| | PREDICTED: low-density lipoprotein receptor-related protein 5-like [Saccoglossus kowalevskii] | 2.0e-18 |
| pfu_aug2.0_441.1_04174.t1 | gi|699241929|ref|XP_009858405.1| | PREDICTED: low-density lipoprotein receptor-related protein 4 [Ciona intestinalis] | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_441.1_04174.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04174.t1 atggatggtcaaaacaaaacaatattgatctcaactaatatcaaaataccagtagggatagccatcgactatacaggaaa cgtattatactggagcgactaccgatacgatacaatagagtcatgcgacttatttgggggtaatcggcgagagattctag ctgacgatagagccgatatatggaagatttttattaggggatctttcatctattacacggcatggaataaacgtaaggtc acaaaggcagacaaactaactggacgaattataccgtggatgtctgattatccagaatttacaagaatagatgacattga tatcattccaaaggataaaaaaccagttaaactgtgtcctgaagtaaatataactaatggtgaattagaatcatcatgcc tgagatatgcaaacagacaatgcgaattcagatgtgatgttggatttgagcctacaaacggagaagggaatatttcttgt ggaccattgggcagatgggaagaggacattgacgatttatgtcaagttaaactgtgtcctgaagtaaatataactcatgg tgaattagaatcaacatgcctgagatatgcaaacagaaaatgcgaattcagatgtgatgttggatttgagcctacaaacg gaaaagggaatatctcttgtggaccattgggcagatgggaagaggacattgaagatttatgtcaagaagtgcaagaagac cagacaatcgaatctgatcctcaaatacaaaaacgcaacatcataattgcacttttgatcataatattcgtagtgatcct tgttgctctgttctga |
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Protein
| Protein ID | pfu_aug2.0_441.1_04174.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04174.t1 MDGQNKTILISTNIKIPVGIAIDYTGNVLYWSDYRYDTIESCDLFGGNRREILADDRADIWKIFIRGSFIYYTAWNKRKV TKADKLTGRIIPWMSDYPEFTRIDDIDIIPKDKKPVKLCPEVNITNGELESSCLRYANRQCEFRCDVGFEPTNGEGNISC GPLGRWEEDIDDLCQVKLCPEVNITHGELESTCLRYANRKCEFRCDVGFEPTNGKGNISCGPLGRWEEDIEDLCQEVQED QTIESDPQIQKRNIIIALLIIIFVVILVALF |
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