Gene
| Gene Model ID | pfu_aug2.0_441.1_04178 |
|---|---|
| Locus | scaffold441.1 : 263472 ... 272358 : - |
| To GenomeBrowser | scaffold441.1:263472..272358 |
| Genes list of scaffold | scaffold441.1 |
| Synonym | pfu_aug1.0_14025.1_25260 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc550523 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_441.1_04178.t1 | 2 | 1 | Band_7 | 39 | 204 | 6.9e-28 | 97.7 | 9.3e-32 | 6.9e-28 | 97.7 |
| pfu_aug2.0_441.1_04178.t1 | 2 | 2 | Band_7 | 311 | 333 | 6.9e-28 | 97.7 | 1.5 | 11000.0 | -3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_441.1_04178.t1 | gi|62955623|ref|NP_001017825.1| | uncharacterized protein LOC550523 [Danio rerio] | 0.0 |
| pfu_aug2.0_441.1_04178.t1 | gi|195995977|ref|XP_002107857.1| | expressed hypothetical protein [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_441.1_04178.t1 | gi|390349648|ref|XP_003727252.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_441.1_04178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04178.t1 atgggggaagtggagcgtgacggtgacgtgggatgctgtggctgtatcctgatagtcctatccgtcttattatgctgtat cttctttccgttttcactattcgggatagttaaggtcatagatgaattcgagagagcggtaatactgagacttggtagag tcaaatctgaaggagctgctggaccaggtatgatattcattctgccgtgtgtggatgaaatgatcaaagtagatttacga acactctcacatgatgtaccaagacaagagattctgacgaaggactctgtgactgtagccgtagatgctgtagtgtatta cagggtacaggatcctgtaatgtccgtctgtaacgtcaatgacgcctttagatccacccatctactggctgctaccacac tcagaaacgtcctcggtatgaaactaatgacggagatcctagctgaaagggaggagatagcaaacactatgcagggtatg ctagacgaggctacggatgattggggaataaaagtagaacgggtcgaagtaaaagacgtacgattaccactccagctaca aagagcaatggcggcggaagccgaggcaactcgagaggcaaaagcaaaggaggcgggagatataatcatggagtcaccga ccgccatgactttacgttatctgcagacgttagggcagatggcggccggcaaagattccacaatatttttccctttgccc ataaacatgatggatctatacatggacaaaggtaaaggtagctcgggaggtaaatcggcgtcatcgtcatctagtaaacc atctaaaaagaaagaaccggaggcgccacctcaagctccggtcgtcaaggagaaggtcccgccgcctgttgtcgaagaaa aatcagcatcaccaccaaacgtccaacaacaatatttgcaggcggaaatcaatgcgcagcctccaccggaagtggtgatg ccgcaaaatcaacaaaacgacgctttccagcgcattgagatggaaaatgttcaaaagagaaatggaagtccgagctcaat gcctgatgtggaagaaacggagagacgtgtacatttagagaaggacatgaccatggaaagtgtacatctttag |
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Protein
| Protein ID | pfu_aug2.0_441.1_04178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04178.t1 MGEVERDGDVGCCGCILIVLSVLLCCIFFPFSLFGIVKVIDEFERAVILRLGRVKSEGAAGPGMIFILPCVDEMIKVDLR TLSHDVPRQEILTKDSVTVAVDAVVYYRVQDPVMSVCNVNDAFRSTHLLAATTLRNVLGMKLMTEILAEREEIANTMQGM LDEATDDWGIKVERVEVKDVRLPLQLQRAMAAEAEATREAKAKEAGDIIMESPTAMTLRYLQTLGQMAAGKDSTIFFPLP INMMDLYMDKGKGSSGGKSASSSSSKPSKKKEPEAPPQAPVVKEKVPPPVVEEKSASPPNVQQQYLQAEINAQPPPEVVM PQNQQNDAFQRIEMENVQKRNGSPSSMPDVEETERRVHLEKDMTMESVHL |
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