Gene
| Gene Model ID | pfu_aug2.0_441.1_04179 |
|---|---|
| Locus | scaffold441.1 : 278062 ... 298928 : - |
| To GenomeBrowser | scaffold441.1:278062..298928 |
| Genes list of scaffold | scaffold441.1 |
| Synonym | pfu_aug1.0_31646.1_55398 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mec2-like protein | GO:0005887 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_441.1_04179.t1 | 2 | 1 | Band_7 | 9 | 179 | 2.9e-39 | 134.7 | 4.0e-34 | 2.9e-30 | 105.4 |
| pfu_aug2.0_441.1_04179.t1 | 2 | 2 | Band_7 | 296 | 353 | 2.9e-39 | 134.7 | 5.3e-10 | 3.9e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_441.1_04179.t1 | gi|675881094|ref|XP_009026049.1| | hypothetical protein HELRODRAFT_86412, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_441.1_04179.t1 | gi|684366236|ref|XP_009162140.1| | hypothetical protein T265_12460, partial [Opisthorchis viverrini] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_441.1_04179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04179.t1 atgttagcatccacggtccgtaatgtggttgcagaatacgaaagggctgtgatattcagattaggacgtgtggtgggagg agccaaaggaccaggtctcttctttctgtggccatgtattgatgagatgaacaaagtggatttgaggacagtggcctttg atgtaccaccccaggagatcttgaccaaggactcggtgacagtttctgtggatgccgttgtttactaccgtattttcgac cccatcatgtctgtgtgtaatgtcgacaatgctttccgatctgctcaactcctatctgcaacaacgcttagaaatgttct tggcaccaagctaatgtcggagcttctgacagaacgcgactccattgctcattctatgcagcaattactcgatacagcca ccgatccctggggaatcaaagtggagagagtggaaatcaaggatgtcagattgcctgtccagttacagagagctatggct gctgaggcagaggcaactagggaggctagagctaaggtggtagcggcagaaggagaacagaacgcgtcccgtgccctgaa ggaggccgctgacgtcatcatggagtccccggccgccatgcagctcagatacctacagacccttgaggggtcaggatcac gtgaatatctcagatggaaaccatcctacctacaacaagaaacaagcaacggagaaggacagcgctccctgacggagatc aacttagaaagttccgataactggaggcagtcacgtgacaatacaacaaaaggatatgaagtggaccgtgacggtgacct tggttgctgtggctgtatcttattcttcttctctatcctctttgttatcttcttctttccattagcactgtgcatgtcat taaaggtgatagctgaatatgaaagagctgtcatttttcgacttgggcgtgttgttgctggtggacccaagggcccaggt atgatatttgtctttccctgtgtggacagtatgaccaaggttgatttgaggactatttcatacgatgtccctcctcaaga ggttgtcgctgcagaaggagaacagaacgcatcacgtgcccttaaagaagcgggtgacgtcatttccgagtccccagctg cattgcagttgagatatttgcagtcgttaggttctattgcgagccagaaagaatcttctatcctgttcccaatcccttta aacatgatgattgaatccaacaaagtctcacgaagttttaagtcgacatccttttcgggttctgggtctaaatcgcaatc tttctttaaagagggagagagcacggcaaagacggaccgtatagattcatacgcaacttcaaatgaagccttttctgtac aaaaagaaagtgacgactcggcgaccagacgaggagaccaaacgcaacaatggaaactatcagaaacgttaacgccggtt ccggacgatcagaaccaacgatcatatgaatggagcgttggaaaacaaattcaggagcagttatccagagaaattgaggt gaaagctgatattaactatagttccctagagcatgaacaatcagacagtattaaagaacctctgatagatgatacgggtt cattcagtgaacagcaaattacatcgacgtcgcaagtggactataattatgcagaaagaagttcggcagcaaacctggct taccaagttcaggattcattcagtgaacgagaagttacaacaacatcgcaagtggactatgcagaaagaaattctgcaac aagcccggcttaccaagttgttgagaagaggaaagttattattactgaaaaattggatatggagccgcaaagacgaccgg aagctgttgtccgtcccagacagagggagccttacgacgagacccaaacacaacacgcggtacaggtgacaaccagaacc aggagcgatatagaaaagcgccccctgttgacaagtatggaacagacaaacgaatcgccaacttcctccgtcagagttag ttcggaacaacatagacaggagtctgtaacgattgaaaggtcagaccgatcgtcgtctgagataaggaaaggacgataca gtactaaaattgtcattggtaaatccgattcctga |
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Protein
| Protein ID | pfu_aug2.0_441.1_04179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04179.t1 MLASTVRNVVAEYERAVIFRLGRVVGGAKGPGLFFLWPCIDEMNKVDLRTVAFDVPPQEILTKDSVTVSVDAVVYYRIFD PIMSVCNVDNAFRSAQLLSATTLRNVLGTKLMSELLTERDSIAHSMQQLLDTATDPWGIKVERVEIKDVRLPVQLQRAMA AEAEATREARAKVVAAEGEQNASRALKEAADVIMESPAAMQLRYLQTLEGSGSREYLRWKPSYLQQETSNGEGQRSLTEI NLESSDNWRQSRDNTTKGYEVDRDGDLGCCGCILFFFSILFVIFFFPLALCMSLKVIAEYERAVIFRLGRVVAGGPKGPG MIFVFPCVDSMTKVDLRTISYDVPPQEVVAAEGEQNASRALKEAGDVISESPAALQLRYLQSLGSIASQKESSILFPIPL NMMIESNKVSRSFKSTSFSGSGSKSQSFFKEGESTAKTDRIDSYATSNEAFSVQKESDDSATRRGDQTQQWKLSETLTPV PDDQNQRSYEWSVGKQIQEQLSREIEVKADINYSSLEHEQSDSIKEPLIDDTGSFSEQQITSTSQVDYNYAERSSAANLA YQVQDSFSEREVTTTSQVDYAERNSATSPAYQVVEKRKVIITEKLDMEPQRRPEAVVRPRQREPYDETQTQHAVQVTTRT RSDIEKRPLLTSMEQTNESPTSSVRVSSEQHRQESVTIERSDRSSSEIRKGRYSTKIVIGKSDS |
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