Gene
| Gene Model ID | pfu_aug2.0_441.1_04180 |
|---|---|
| Locus | scaffold441.1 : 302440 ... 311168 : - |
| To GenomeBrowser | scaffold441.1:302440..311168 |
| Genes list of scaffold | scaffold441.1 |
| Synonym | pfu_aug1.0_7614.1_67708 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mec2-like protein | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_441.1_04180.t1 | 2 | 1 | Band_7 | 44 | 116 | 5.7e-33 | 114.3 | 7.4e-17 | 5.5e-13 | 49.2 |
| pfu_aug2.0_441.1_04180.t1 | 2 | 2 | Band_7 | 118 | 239 | 5.7e-33 | 114.3 | 2.9e-22 | 2.1e-18 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_441.1_04180.t1 | gi|269784867|ref|NP_001161585.1| | MEC2-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_441.1_04180.t1 | gi|198419662|ref|XP_002124956.1| | PREDICTED: erythrocyte band 7 integral membrane protein isoform X2 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_441.1_04180.t1 | gi|198419666|ref|XP_002124901.1| | PREDICTED: erythrocyte band 7 integral membrane protein isoform X3 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_441.1_04180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04180.t1 atgggtagaggtaagggagatgaagtggagcgtgacggggacatcggatgctgtggatacatcctgtggtttatgtcatt cctcattgtgttgctgttcttcccattctcactatgtatggcaatcaaggtagtggcagaatatgaaagagctgttatat ttagacttggaagggtagtgggcggagccaaaggaccagggttgtttttcttgtggccatgtattgacgatatgaagaaa gtggatcttagaacaatagcctttgatgttccgccacaagagattttgaccaaggattctgtgacggtcgccgttgacgc cgttgtatatttccgagtgttcgaccctataatgtcgattttgaccaaggattctgtgacggtcgccgttgacgccgttg tatatttccgagtgttcgaccctataatgtcggtatgcaatgtagatgacgcattcagatctggacagttattggcggca acgacgcttagaaacgtcctgggaacaaaacttatgtcagagctattgacggaacgcgactctatcgcagcttcaatgca acaacaactagatgttgctacagatccatggggaattaaagtcgaaagagtggaaatcaaagacgtgagacttcctatcc aattacaaagagctatggctgccgaggcagaggcaactcgggaggctagagctaaggtcgtagccgcggaaggagaacag aatgcgtcacgtgctctaaaggaagccgctgacgtcatcatggagtccccggccgccatgcagctcagatacctccagac cctgggaatgatatctgcagagaaaaattccaccatcatcttccctctcccaattgatatgatgcaagcattcatgaaga agtag |
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Protein
| Protein ID | pfu_aug2.0_441.1_04180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_441.1_04180.t1 MGRGKGDEVERDGDIGCCGYILWFMSFLIVLLFFPFSLCMAIKVVAEYERAVIFRLGRVVGGAKGPGLFFLWPCIDDMKK VDLRTIAFDVPPQEILTKDSVTVAVDAVVYFRVFDPIMSILTKDSVTVAVDAVVYFRVFDPIMSVCNVDDAFRSGQLLAA TTLRNVLGTKLMSELLTERDSIAASMQQQLDVATDPWGIKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVVAAEGEQ NASRALKEAADVIMESPAAMQLRYLQTLGMISAEKNSTIIFPLPIDMMQAFMKK |
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