Gene
| Gene Model ID | pfu_aug2.0_4426.1_22559 |
|---|---|
| Locus | scaffold4426.1 : 21016 ... 33855 : + |
| To GenomeBrowser | scaffold4426.1:21016..33855 |
| Genes list of scaffold | scaffold4426.1 |
| Synonym | pfu_aug1.0_7274.1_09520 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4426.1_22559.t1 | 8 | 1 | TIL | 30 | 47 | 2.4e-08 | 33.9 | 0.99 | 4900.0 | -2.3 |
| pfu_aug2.0_4426.1_22559.t1 | 3 | 1 | VWD | 58 | 208 | 1.4e-34 | 119.5 | 8.2e-28 | 4.1e-24 | 85.5 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 2 | TIL | 343 | 394 | 2.4e-08 | 33.9 | 4.9e-12 | 2.4e-08 | 33.9 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 3 | TIL | 449 | 474 | 2.4e-08 | 33.9 | 3.0 | 15000.0 | -5.1 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 4 | TIL | 470 | 488 | 2.4e-08 | 33.9 | 0.56 | 2700.0 | -1.5 |
| pfu_aug2.0_4426.1_22559.t1 | 3 | 2 | VWD | 482 | 493 | 1.4e-34 | 119.5 | 2.9 | 14000.0 | -4.0 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 5 | TIL | 555 | 593 | 2.4e-08 | 33.9 | 0.39 | 1900.0 | -1.0 |
| pfu_aug2.0_4426.1_22559.t1 | 3 | 3 | VWD | 593 | 671 | 1.4e-34 | 119.5 | 4.1e-12 | 2.0e-08 | 34.5 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 6 | TIL | 706 | 722 | 2.4e-08 | 33.9 | 0.64 | 3200.0 | -1.7 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 7 | TIL | 808 | 866 | 2.4e-08 | 33.9 | 0.00072 | 3.5 | 7.7 |
| pfu_aug2.0_4426.1_22559.t1 | 8 | 8 | TIL | 907 | 918 | 2.4e-08 | 33.9 | 3.0 | 15000.0 | -3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4426.1_22559.t1 | gi|690426927|ref|XP_009332378.1| | PREDICTED: uncharacterized protein LOC103925393 [Pygoscelis adeliae] | 0.0 |
| pfu_aug2.0_4426.1_22559.t1 | gi|585721674|ref|XP_006813313.1| | PREDICTED: uncharacterized protein LOC102805334, partial [Saccoglossus kowalevskii] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug2.0_4426.1_22559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4426.1_22559.t1 atgaagtggttgttacttcagtgtgtagccttgtttgctattatagcaaatgtactccagccaacattggcagattgtgc agctaatgcatcattaaagaaaggccaatgcagatgtaataaaggtttctttggcgatcctttcgtagaaggatgtgcag agatgtgtatgtgcagtgctcgaggggatccacattatgtaacatttgacggcagaaagatccatttccaaggcaactgt aaatacgtacttgcccggtccacacatccggattgtaggttagaggtcactgtgaagaatgaacatcgctcaaaacgctc cgttacctttacaagagagctcgactttacgtacaatgggattactttacggcttttacctgaaaggaaactaaaagtcg atggattggaaacagatccttgtaactatgtaagcccggatggatctatcagtattaactgtgctgggaacgtcctgcgt gtggtgacaaatccttgtggaagcatcttagaatggagtggaggacattctgcccaaatcatgatccctaaaatttatgc cggaggaaataatttatctgggatctgtggtaactgcaatggtgatccaagtgacgacatgatttctcaatttagacgcg atgtagctaatgaggaaaatgcagatcacaagttcgggagtagctggcaggttgctgatgactctgacattaaggatcaa gaagtatgtacagatgaattttttcccataccaaaatgtactgaaaacaccaagttagctgccgctgctccggataattg tggaattctagatcctagtatagatggaccgtttaaagaatgcttagtggaagcagacattaagctcaaggagtacgaag actgcgtttttgactattgccttttttcagatgagcgacaggaattattcaaagaggctgtctgcagcatgcataataac ttgagacaactttgcaatgatttcggatataatatcacttggagcgatccaaactgccccattcaatgtggtaaaaacga agagtactatgacacgatgtctgggtgccaaccaacgtgtagaaaccccaaccccaaaaaatgtaagctgccagcatcaa gtggatgcggatgcaagaaaggttatgttctcggtgccctggggcagtgtgtacacaggaatacagaatgtggatgttta tatgatacggatggaagatactacccgcttggagcaacattcacaactcctgattgcaaaatggttaaagaatgcaaagt acacgcacggaaatcaagaattatgacaatacaggatatgggaccttgctctgaatttggtttttgtactaatgaggatg gtgacttcaagtgtgtatgtcagcatggaatgaagggagatgggcgaacttgtacccctgactgtagcggtgaagttcac tatgtcgataagacatgtacaagtcagccaaataagaggaaaacatgtggaatacccgaagctagtagaattgtttccat tgagctgaaggagcagcactccgaaacagaatgtataaaagacgaaacgttttggctatggaatggaagagataataaac acaggtttttagttagagctggatgtagcggaacgtttactttgggcttctatctaaaagatgcatgcactgaaacatgt ggaactaatgcctacttcaatagtcgaaagcagaaatgtgaatgcaggaaaggtttttacggtgacccgaaggcgtcatg caacaggatgtgcgtgtgccgtgcctcaggagaccctcactaccgcacgtatgatggtcaaacaatacacttcatgggga cttgcaaatacacattgtcacgtctgctagatacagccgatccttgttatttcaatgttgaagtaaaaaatgagagacgc tatggtaataatcgagtaactcacacgagacttgtggatctaaaaatgcatggagcaacagtcaggctcatgaaggacag gaaagttatgaagcaggatgatttgcgcacaaaagaggggaaggttatcggtacaacatggaagagagatcatagattta taggagatagctatcaagtaccagacgattctgactctcccgaaacatgtagaaagaaaaccaatgaaccaaaggactgc accgagtctgaacttgaaatggccagtagtcctgattattgtggattattggacttctcaagtgaacttgaagaattcaa aggatgtcttattgatttgggactagaaagacacgagctgtacttctcgtgtttaatcgatgtatgtaactatgcgaatg acgtcgaagaagcaaaagacgtagcttgtgacgctataacagatgctatagaacgttgtggagagatgaatgaacatgtt catatccaattggctggaatttgtggagaaaatagaactcggacaaagtgcagggatgaccaagttttggcatacgatac cagttgtccatcaacatgtgtaacagaagatgtcgaggcttcagaatcctgtacacccattctagaatgtcattgtaaga aaggaactattgacgaaaacggcaaatgcgtgtcaaaatgtgggaagtacgtggatggccaatacataccggccagtggc ggtgttatgcaagatgattgcaagaagatacattttctcgacacaaatggagaattggtaaccaaggacctccaatgtga tatcaactacaagaaatgcggcgagaatcattgcattgtctcctga |
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Protein
| Protein ID | pfu_aug2.0_4426.1_22559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4426.1_22559.t1 MKWLLLQCVALFAIIANVLQPTLADCAANASLKKGQCRCNKGFFGDPFVEGCAEMCMCSARGDPHYVTFDGRKIHFQGNC KYVLARSTHPDCRLEVTVKNEHRSKRSVTFTRELDFTYNGITLRLLPERKLKVDGLETDPCNYVSPDGSISINCAGNVLR VVTNPCGSILEWSGGHSAQIMIPKIYAGGNNLSGICGNCNGDPSDDMISQFRRDVANEENADHKFGSSWQVADDSDIKDQ EVCTDEFFPIPKCTENTKLAAAAPDNCGILDPSIDGPFKECLVEADIKLKEYEDCVFDYCLFSDERQELFKEAVCSMHNN LRQLCNDFGYNITWSDPNCPIQCGKNEEYYDTMSGCQPTCRNPNPKKCKLPASSGCGCKKGYVLGALGQCVHRNTECGCL YDTDGRYYPLGATFTTPDCKMVKECKVHARKSRIMTIQDMGPCSEFGFCTNEDGDFKCVCQHGMKGDGRTCTPDCSGEVH YVDKTCTSQPNKRKTCGIPEASRIVSIELKEQHSETECIKDETFWLWNGRDNKHRFLVRAGCSGTFTLGFYLKDACTETC GTNAYFNSRKQKCECRKGFYGDPKASCNRMCVCRASGDPHYRTYDGQTIHFMGTCKYTLSRLLDTADPCYFNVEVKNERR YGNNRVTHTRLVDLKMHGATVRLMKDRKVMKQDDLRTKEGKVIGTTWKRDHRFIGDSYQVPDDSDSPETCRKKTNEPKDC TESELEMASSPDYCGLLDFSSELEEFKGCLIDLGLERHELYFSCLIDVCNYANDVEEAKDVACDAITDAIERCGEMNEHV HIQLAGICGENRTRTKCRDDQVLAYDTSCPSTCVTEDVEASESCTPILECHCKKGTIDENGKCVSKCGKYVDGQYIPASG GVMQDDCKKIHFLDTNGELVTKDLQCDINYKKCGENHCIVS |
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