Gene
| Gene Model ID | pfu_aug2.0_443.1_10774 |
|---|---|
| Locus | scaffold443.1 : 18586 ... 21456 : + |
| To GenomeBrowser | scaffold443.1:18586..21456 |
| Genes list of scaffold | scaffold443.1 |
| Synonym | pfu_aug1.0_3926.1_08769 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_443.1_10774.t1 | 2 | 1 | Death | 96 | 154 | 1.7e-06 | 27.7 | 8.4e-10 | 6.2e-06 | 25.8 |
| pfu_aug2.0_443.1_10774.t1 | 2 | 2 | Death | 402 | 427 | 1.7e-06 | 27.7 | 1.0 | 7700.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_443.1_10774.t1 | gi|554838603|ref|XP_005929751.1| | PREDICTED: uncharacterized protein LOC102299701 [Haplochromis burtoni] | 8.0e-10 |
| pfu_aug2.0_443.1_10774.t1 | gi|736198175|ref|XP_010773648.1| | PREDICTED: mitochondrial antiviral-signaling protein isoform X1 [Notothenia coriiceps] | 9.0e-10 |
| pfu_aug2.0_443.1_10774.t1 | gi|736198179|ref|XP_010773650.1| | PREDICTED: mitochondrial antiviral-signaling protein isoform X2 [Notothenia coriiceps] | 1.0e-09 |
| pfu_aug2.0_443.1_10774.t1 | gi|548352963|ref|XP_005728737.1| | PREDICTED: vegetative cell wall protein gp1-like [Pundamilia nyererei] | 1.0e-09 |
| pfu_aug2.0_443.1_10774.t1 | gi|348520740|ref|XP_003447885.1| | PREDICTED: vegetative cell wall protein gp1-like [Oreochromis niloticus] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_443.1_10774.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10774.t1 atgacatatgaggatcggcagtgtagagatcttctccggaggaatgaggtcttacttataaaggagctggatgccatgga actgatggttcatctaccatgtctacccaaacaaagcaaggaaggtatagaagcagagaacagggaacgtggtcggactc gtggtatgatgaagctccttgatgaacttccacgcagagataggtggcaccaccagtttgtggaggctctacgccatccc gatatcaacaagccagcattagcacaactaatatttccnataaagttatatgaaaagttaaccatagaagatgtccagag gatagagtgttacccagacggtgggagttgtactttgtctctgatcactcagtggagccacaaatctggtgccacactgc acaatctgatgtcggtactggacaaagtggagaggtatgacatactggatgagctgtctagaattaaaggaatggagaag atagacttccctaagagcgtgctaaattgctacacaatgggagaaaataaggagctgggatcctgtatatcaatactgca atccatgaagccgcatgtgaagcaggattcaaaaacagactttgttgaaataacggttggtagcacggtatgtctaccac ctgaagacgaaccccacacgtcacacagctcttgtggttttcctgtaagctgcagtgacagaaatgctagtttaactagg acagataaaacccagcagtcacactggcttggtggctctgccatactttgcgagaaagacgtcattttgacaacggcagt acatcctgagagtgttcagtgctgtgatgatgctggtgacattaccggtatgtgtacatgtgacaaccttgacaaacatg tagagggcaaaacattacatccaccaatcaaaagcagtgtggaaagccagtcatgtgacataattgacaatcctgattgg aagaaagacatttcaattcacacagagaccaaccacccactggatgagtccactaagaaatcaatgaaatacgataattc cacttacgcatctacaggtttttctgttacttgttcaagtaataatgacgtcatttcaaacagtgggcattcatcacagg atacaggccagtcatttctttcgaatgatgctgtaacaacaaaagacagtcatggcagtagtgctgccagatctaatgac tttcagattccgaccaatcagattcagaatttcagactgttcactttcccatgggaaagtccactgcaacagattttaaa ggccagatggttgtatttttctgtaggaggtgcattatgcctgaattacatgttaacgaaaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_443.1_10774.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10774.t1 MTYEDRQCRDLLRRNEVLLIKELDAMELMVHLPCLPKQSKEGIEAENRERGRTRGMMKLLDELPRRDRWHHQFVEALRHP DINKPALAQLIFXIKLYEKLTIEDVQRIECYPDGGSCTLSLITQWSHKSGATLHNLMSVLDKVERYDILDELSRIKGMEK IDFPKSVLNCYTMGENKELGSCISILQSMKPHVKQDSKTDFVEITVGSTVCLPPEDEPHTSHSSCGFPVSCSDRNASLTR TDKTQQSHWLGGSAILCEKDVILTTAVHPESVQCCDDAGDITGMCTCDNLDKHVEGKTLHPPIKSSVESQSCDIIDNPDW KKDISIHTETNHPLDESTKKSMKYDNSTYASTGFSVTCSSNNDVISNSGHSSQDTGQSFLSNDAVTTKDSHGSSAARSND FQIPTNQIQNFRLFTFPWESPLQQILKARWLYFSVGGALCLNYMLTKK |
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