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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_443.1_10775
Locus scaffold443.1 : 24863 ... 30975 : -
To GenomeBrowser scaffold443.1:24863..30975
Genes list of scaffold scaffold443.1
Synonym pfu_aug1.0_3926.1_08769

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_443.1_10775.t1 gi|676482724|ref|XP_009062795.1| hypothetical protein LOTGIDRAFT_167083 [Lottia gigantea] 3.0e-35
pfu_aug2.0_443.1_10775.t1 gi|556983289|ref|XP_005997776.1| PREDICTED: rhotekin-2 [Latimeria chalumnae] 2.0e-16
pfu_aug2.0_443.1_10775.t1 gi|731493217|ref|XP_010591961.1| PREDICTED: rhotekin isoform X4 [Loxodonta africana] 2.0e-14
pfu_aug2.0_443.1_10775.t1 gi|727021461|ref|XP_010399074.1| PREDICTED: rhotekin-2 isoform X2 [Corvus cornix cornix] 1.0e-13
pfu_aug2.0_443.1_10775.t1 gi|530563810|ref|XP_005278499.1| PREDICTED: rhotekin [Chrysemys picta bellii] 2.0e-12

Transcript
Transcript IDpfu_aug2.0_443.1_10775.t1
Definition-
>pfu_aug2.0_443.1_10775.t1
atgatggctagcggtatgatggagttaaaggacgtagaggattcagtggggacgtttgacctgcagatagagccgacgtc
ggagggaggaccttgtgaactaccgttatttggggtatactgcttacggcttgctgctcaacctgagtgtcttactacac
ccactgttacaggctatcttaatctacagcacacacttgtggccgactccaaggaggacttaaacagatggtgggatgga
ctacagcagcatttattggaccaagctttatggaagcatgcatgtgacaacctcataccaatcaaatcaccttcaccgca
taaaaaaccagtattcctcagaaaatcatctatatatgatgaaactccattacaagacaagaaagactcacgaccaaaca
gtatggtaggagaactccagaaggaggacgaccaattaagtaagatgttagatacgctgatgggagaggctaaacaaatc
aggggagatcagccttacagcaccactgtatga

Protein
Protein IDpfu_aug2.0_443.1_10775.t1
Definition-
>pfu_aug2.0_443.1_10775.t1
MMASGMMELKDVEDSVGTFDLQIEPTSEGGPCELPLFGVYCLRLAAQPECLTTPTVTGYLNLQHTLVADSKEDLNRWWDG
LQQHLLDQALWKHACDNLIPIKSPSPHKKPVFLRKSSIYDETPLQDKKDSRPNSMVGELQKEDDQLSKMLDTLMGEAKQI
RGDQPYSTTV

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