Gene
| Gene Model ID | pfu_aug2.0_443.1_10778 |
|---|---|
| Locus | scaffold443.1 : 47666 ... 80559 : + |
| To GenomeBrowser | scaffold443.1:47666..80559 |
| Genes list of scaffold | scaffold443.1 |
| Synonym | pfu_aug1.0_3926.1_08771 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_443.1_10778.t1 | 2 | 1 | Peptidase_M16 | 1139 | 1184 | 3.7e-28 | 98.1 | 0.22 | 1100.0 | -0.8 |
| pfu_aug2.0_443.1_10778.t1 | 2 | 2 | Peptidase_M16 | 1945 | 2035 | 3.7e-28 | 98.1 | 1.2e-30 | 5.9e-27 | 94.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_443.1_10778.t1 | gi|705680905|ref|XP_010118628.1| | PREDICTED: LOW QUALITY PROTEIN: F-box only protein 41, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_443.1_10778.t1 | gi|698427480|ref|XP_009696611.1| | PREDICTED: F-box only protein 41, partial [Cariama cristata] | 0.0 |
| pfu_aug2.0_443.1_10778.t1 | gi|694636303|ref|XP_009476919.1| | PREDICTED: F-box only protein 41, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_443.1_10778.t1 | gi|723551195|ref|XP_010298307.1| | PREDICTED: F-box only protein 41, partial [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_443.1_10778.t1 | gi|348529660|ref|XP_003452331.1| | PREDICTED: F-box only protein 41 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_443.1_10778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10778.t1 atggacagtggtatcagccccgccctttgtgaccaggactatttgagcgacattataccatacagatgtcctaaatgtgg cgacacccgagtattcacctccctgagggaattaaaacgccaccttgagaccgatcacgcctataaaatggggtttgtca aaccgcggacgagagctaaggtgttcagttacagcgtagacgacagtaaaccatttccgaaagatatagccaatacaaga gggtggaccggatacaataaggacggtcccgccaggctgaggacgggaatttctacaaggtacaccgacaaggatgatga aaattctccccttctcgatacattcagggacgaaactaaaagactggagaggagagtacagctagctaaagagaccgaaa tgatgaacaaacttaatagaggcgtaaagggtggagatcaagacggccgccatgtacacaaaacgaccaaggtggaccgg aatgacgtcatgtccagactgaccgctcctgacgtcagcttgacggagagtattcgttccctgaatgaggagatttgtaa atcacgccagcatcaatgggatacagctaataacctgtacaggtctgaacacgtcatcaccgggatagaaaaggcagcgg aacagaggtgtcacgaacagcaagggatcatacaggaactggccaacagcttaaaactaaaggaggatcagctaataaag gcaaccaagggtttagaagagctcgaaagagagcgtcaaggactgatgcgagaaaccaacgtgattctgcacaggagtga actgagcaatgagaaccttcgttcagagctcactaggagagacggtctgatagagagcactaatgagcagttacacaacc tacagttacagctcagagagagccttcaggagagggacggggagctagcacgtacacagagccgacttgaggagctagag agggagagagaggtactacgggaggagacccagcggctggtgtcaggagtagaaatggacaaatctgtgctgaaacaaac tctagatatcaaggagaaccaattaagaaaagttcaattcgatttacaaaaaacgagactcgacaaggagaatctaataa aggagagtatgaacctatacaggactgcaagtgaaggcaaccttaaactagggacagtaatagaggccaagcagtcccag cttactgatgtccaacaacaagtactacagatgagagaggcacatgagttattattgagggaatccaagcagttaacaga gcaggctaacgttcatcgtcagacgctgatgcaggttctatctgacaaggaggctcagctggcggaaacaagacaacagc ttcaagatctgatgacccagaggcatattatggaaagggatattccagtacatggagaagatagcattattcagactgtc cataatgaagaccaatcaggcagggacaccagtaatactgtattacagaatcacatgcttgatatgcaggataaattgca acagaaagaaagagaacttgatacattgaaacagtttatcagtaatacagctgagaaggaagctatagcacgacagaagc tggaaacatttattaacggactcataagtagagccgatcaggcggagaacgaactcaaacaggtgaagagtcaatctgga accagcattgaggagaacagaggtggcagaggtcaaggtcatccaaggttaaagaagaaaattaatacagataggggcaa caaaaagaccaatgcagtagatggacagaatcatccacagtctaccacgctaggtccagaactcacaagcaccccaatcc tagcagccaaaggaaaccagagtaattctagaaaacaacctagtgcttcaacggctaaacaagtaatggatgatgccatt gctccatggaacaagtcattacccgcattagcctatgctgaggatctgtcaagagtcaagaactttctttccaaaggaaa aaagaaattaaagaatctccttaagccaggctcaaaaacaccttcacccacagcgagaaaatctaggccgaacaaaaaaa gtaaggacgacacaaatcaaggggcttcatcagctgaacatcaagacagaaaactgcgatcttacgacttctctcccgag catgactctacttcctactctcctttaccagactctttacagcatgtttataatgtaaccacctcaccagttatacataa tgcacaagatacaaagtctgatatgctaagaaatggtacatcccatcagccaatcaaatctaaaattcaaacaccctcca ttggaatccctattgaagatttacaggaaaatgcgatgatgaatagtaacttctatgatgataaagatacgagtcataat gagttacctcagccattacctagacacgctactgatgaaagaagtcttgagcagaattcagcgtcaatttcacctgaaaa tcatcgaaatttatccgagatccaaccaatgagtgaagattcatacttaaatttaccctcccatcatgatgaaatcatat ttatccctgtaagttctaaaacaggaagagttctgaagcaaataccagctgatgcttatggaagtataaagactcgtcaa catgcggatgaaagaagccatcatgactctggaactcatgcaaccttagaagctagagattttagattagacggaaagga gagcagccaggtcttgccagcgttagtagcaccaaacaagccacaagtacgggtcaatctgcacacagatagttcatcag attctttgtatgatgaatccagtgtacatgaccttgaagatggccattccctgtgtgacgtgggatctattctggaagat gagccagcttcagaggacatacaaagtacactagatgaggaaatggacaatgacggcattatctgggtcaaagaagaaag ttacgtgccgtctgattacctcgattatcaacagcgatttggcccttatggcagtgaaatgaggtcaaggtcatcaaact cagtgccagaggtggataacgttttacacaattttaatgatgtttcttcaccaccataccacagttatgacagtgaggcc atgccagatacatatcccaaaatgcaaagtaatcatgtccactttaaggaagatcctaggtctgatccatcgggatatga tagaaaacattttccgcagaaatacaatttcagaaacaaacacaatgtcggaacgtggatgagtccggctgcaaatacaa atgaccaatcatctgagtcgtactcaaaattcgaaagtgaggactccatatcatcaaagtcagggaataagagctatcca ctgtacaaaggctctcaaacaaaccatcgaaggatcagagaaatgaagagcaaaactgctcgatctaagtcaccaaggat tttggacaattttgaatcaaccaatcagaattcaggcaggtttgagccagtcaatcaggatgcagaacttaaagagatgt caattaaggagtacaaggaggtagatacagtttcagatacaagtttcagaagtagtccaagtgggagggaatcacattca acatcaaatggaagggcaagtgagagtattaaaaatgtaagccatagcaatgactacaaaagtagaggtatggaaacgcc tgacacatccatcgatgaaatgagcaaaccaaaagaagaagaaagtattattcttgctgtggatacacacaatttgaaag cctcagctattgagaatcaaagtgccagaaaagatatgaatagagatgtcaccagaaaaggacttcagaaagaagaaata tcacctaaggaaaaggaagaagtaagttcatcccgcaaagaaatgggtaaatttaaggaatctgatgaggaagattatca tgacaacagaatcctaaacaaaggtgtgtccaacaatgatctgaggaatgatgagcacaatgaggaaactgttgacaaca ttgtagatgaaggatctgacaacactttaaataaggagagtatacattacaagtcaagtggagattcagaatcagaggca tgcctcatgtcagatgcctcctctgaggctgactcttattgtcatcagtcttataaaaagttaggtgaggattttgagga tatagaggaatcaccaagttctgaatccttggagcatctggacttaaggaggaggacatccaagggtatcctacagaaag caatgaccgttcagtcagaggaagggtctgatgttaatgttgaatcagaattagaaagccagatggtgaaatccttaagt gaagcaaaggaagatgttatgtcagaggagaaaaggatagaggatgatgaagtgaaaaatacaacgaatgaatactatgc gctgtctgaggacttcaaggtgaattctgatcattctgaagatgaggacattcttgaggactcattacctcagtcacaga ggacagagtatgagttacatgaggacagtccttcagagttggaacaaccaacatctgtgcaaacattgaactcaggatca ggaaatgatgaaccacaccccatattgcagagagatgggagtttagatggtgagctacacccaatttctgagaggattga gagtttagaagatggacctcgcccagtttttgagaggaatgagagtttagatggactttttgctgaagttcaggagacag atgaagactccatgtcagttacaagtgatctcagatcaaggctgaccccagcatcttctttagatttgaagtctagagac aaacttgcatcagagacagaggaagaatacatagccagtattagggggagtttagagccaggacttgagaggtttctaca ggtgacagaatccacactgagatctatagagattgtcaactgtggatacctactcacagacaagagcatatggcttgcaa gctgttactgtcgtctgcttcacaatgtgacgtatatcaccaatagtaacccgctaggaccagacgtcatgtgggcgttt ggtgctggatgtaggactgtaacatcattggtcatcccaccattgtatccatgtgagaattctgacagatttagcaacaa gtgtctacagacaatatcacaatgctgtgttgacctcgaggtcctgagtattggtggaccaaatatagatataaatggac tggtgcttgttgtcaagtcgtgtcagcgtctccggaggtttgagttacatcatactaacaccatcgacgaggatacagcc gtggcattgtgccgtttaggattacagaatctcacacatctcagctttatacatactacagtcactcccgcagcactgat gcacttttatgagaattgcaggcacctgttgagtttagttgttgcaatgtcaatttctgacttcactaatcacagagagg acgtggagttagaggagatagagaagtggtgtctatttgtacaagaaatgaagcaacaaaacattgcacattttagcgaa attttacgggatcgcgatcgtccgttaaaactcgaaagacgaccacaaacagcagtgaatgacaaagcagatgaaaattt atcgtcgtctgtcgtcatacgaatgaatgccaagtcttttactcttttacatcgcttaagttcatcattcatttgtgttt ctaaatcggtctccctcgtcacccaaagaacatcaaggacagtgtcaagcatgtcgaatgagcacctagtcagaacgttc agtggggaagatgttaccaaatcagctgaggaccagagagaatacagaggattggaaatgaagaatggaatgaaggttct actcatcagtgatcctaaaacagacaaatcctcagcagctatggacgttaatataggatattacaaagacccttgtgaat tgccagggttggcacatttctgtgaacatatgctttttcttggaacaaaaaagtatgaagaggaaaatgaatacagcaag tttttgaacgagcatggaggtggatcaaatgcctacacctcaggagaacatacaaacttctacttcgacatcagccctga atcgctaggtggagctctcgataggtcagtattatatactgtaaattgctttattttcgccagtaccaattttcatcaat tcgttcaaaattaccatttcgtcagtacgtaa |
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Protein
| Protein ID | pfu_aug2.0_443.1_10778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10778.t1 MDSGISPALCDQDYLSDIIPYRCPKCGDTRVFTSLRELKRHLETDHAYKMGFVKPRTRAKVFSYSVDDSKPFPKDIANTR GWTGYNKDGPARLRTGISTRYTDKDDENSPLLDTFRDETKRLERRVQLAKETEMMNKLNRGVKGGDQDGRHVHKTTKVDR NDVMSRLTAPDVSLTESIRSLNEEICKSRQHQWDTANNLYRSEHVITGIEKAAEQRCHEQQGIIQELANSLKLKEDQLIK ATKGLEELERERQGLMRETNVILHRSELSNENLRSELTRRDGLIESTNEQLHNLQLQLRESLQERDGELARTQSRLEELE REREVLREETQRLVSGVEMDKSVLKQTLDIKENQLRKVQFDLQKTRLDKENLIKESMNLYRTASEGNLKLGTVIEAKQSQ LTDVQQQVLQMREAHELLLRESKQLTEQANVHRQTLMQVLSDKEAQLAETRQQLQDLMTQRHIMERDIPVHGEDSIIQTV HNEDQSGRDTSNTVLQNHMLDMQDKLQQKERELDTLKQFISNTAEKEAIARQKLETFINGLISRADQAENELKQVKSQSG TSIEENRGGRGQGHPRLKKKINTDRGNKKTNAVDGQNHPQSTTLGPELTSTPILAAKGNQSNSRKQPSASTAKQVMDDAI APWNKSLPALAYAEDLSRVKNFLSKGKKKLKNLLKPGSKTPSPTARKSRPNKKSKDDTNQGASSAEHQDRKLRSYDFSPE HDSTSYSPLPDSLQHVYNVTTSPVIHNAQDTKSDMLRNGTSHQPIKSKIQTPSIGIPIEDLQENAMMNSNFYDDKDTSHN ELPQPLPRHATDERSLEQNSASISPENHRNLSEIQPMSEDSYLNLPSHHDEIIFIPVSSKTGRVLKQIPADAYGSIKTRQ HADERSHHDSGTHATLEARDFRLDGKESSQVLPALVAPNKPQVRVNLHTDSSSDSLYDESSVHDLEDGHSLCDVGSILED EPASEDIQSTLDEEMDNDGIIWVKEESYVPSDYLDYQQRFGPYGSEMRSRSSNSVPEVDNVLHNFNDVSSPPYHSYDSEA MPDTYPKMQSNHVHFKEDPRSDPSGYDRKHFPQKYNFRNKHNVGTWMSPAANTNDQSSESYSKFESEDSISSKSGNKSYP LYKGSQTNHRRIREMKSKTARSKSPRILDNFESTNQNSGRFEPVNQDAELKEMSIKEYKEVDTVSDTSFRSSPSGRESHS TSNGRASESIKNVSHSNDYKSRGMETPDTSIDEMSKPKEEESIILAVDTHNLKASAIENQSARKDMNRDVTRKGLQKEEI SPKEKEEVSSSRKEMGKFKESDEEDYHDNRILNKGVSNNDLRNDEHNEETVDNIVDEGSDNTLNKESIHYKSSGDSESEA CLMSDASSEADSYCHQSYKKLGEDFEDIEESPSSESLEHLDLRRRTSKGILQKAMTVQSEEGSDVNVESELESQMVKSLS EAKEDVMSEEKRIEDDEVKNTTNEYYALSEDFKVNSDHSEDEDILEDSLPQSQRTEYELHEDSPSELEQPTSVQTLNSGS GNDEPHPILQRDGSLDGELHPISERIESLEDGPRPVFERNESLDGLFAEVQETDEDSMSVTSDLRSRLTPASSLDLKSRD KLASETEEEYIASIRGSLEPGLERFLQVTESTLRSIEIVNCGYLLTDKSIWLASCYCRLLHNVTYITNSNPLGPDVMWAF GAGCRTVTSLVIPPLYPCENSDRFSNKCLQTISQCCVDLEVLSIGGPNIDINGLVLVVKSCQRLRRFELHHTNTIDEDTA VALCRLGLQNLTHLSFIHTTVTPAALMHFYENCRHLLSLVVAMSISDFTNHREDVELEEIEKWCLFVQEMKQQNIAHFSE ILRDRDRPLKLERRPQTAVNDKADENLSSSVVIRMNAKSFTLLHRLSSSFICVSKSVSLVTQRTSRTVSSMSNEHLVRTF SGEDVTKSAEDQREYRGLEMKNGMKVLLISDPKTDKSSAAMDVNIGYYKDPCELPGLAHFCEHMLFLGTKKYEEENEYSK FLNEHGGGSNAYTSGEHTNFYFDISPESLGGALDRSVLYTVNCFIFASTNFHQFVQNYHFVST |
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