Gene
| Gene Model ID | pfu_aug2.0_443.1_10780 |
|---|---|
| Locus | scaffold443.1 : 110476 ... 114875 : - |
| To GenomeBrowser | scaffold443.1:110476..114875 |
| Genes list of scaffold | scaffold443.1 |
| Synonym | pfu_aug1.0_9262.1_02731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_443.1_10780.t1 | 1 | 1 | zf-C3HC4_3 | 389 | 437 | 1.5e-15 | 56.5 | 1.1e-18 | 2.4e-15 | 55.9 |
| pfu_aug2.0_443.1_10780.t1 | 1 | 1 | zf-C3HC4_2 | 392 | 430 | 5.4e-08 | 32.7 | 4.3e-11 | 9.2e-08 | 31.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_443.1_10780.t1 | gi|524864709|ref|XP_005089189.1| | PREDICTED: uncharacterized protein LOC101846543 [Aplysia californica] | 0.0 |
| pfu_aug2.0_443.1_10780.t1 | gi|676450862|ref|XP_009052517.1| | hypothetical protein LOTGIDRAFT_231775 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_443.1_10780.t1 | gi|260826087|ref|XP_002607997.1| | hypothetical protein BRAFLDRAFT_120859 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_443.1_10780.t1 | gi|72007693|ref|XP_786151.1| | PREDICTED: uncharacterized protein LOC581034 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_443.1_10780.t1 | gi|296531398|ref|NP_001171844.1| | uncharacterized protein LOC100366774 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_443.1_10780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10780.t1 atggcagaaggaggtgacattcccaatttatctgtaaattctacaaacatggaagctcaatgtagcagcgaggatgacat tgctctgatgagattcctggagaaatctaggacagacagaatgtatgagcttagacagatacagcatggagagcgtcctg taacaagtacagaacatcgtcagtccatcgaccacttcttctcaaagcggttagaagcacaggacaaagcagccagcaca ggaaaagaaaacgtacctgtaaatgtagaagatgtggaggaagtacgaccagaaacagttgtcgtggaaatccaaggatt ggttgaacaacaacgggtatcaaacgtcttatccacaaattttagacaaagacttgaaaacattatacgtggcagtattt caactgtaacaaggaataggacccctagaccatctgtttcaccttccccctcccctctacaagcagccacaccctctaca cagtcacgtgcgtcaaccccagcagaggagaggccagtccccgtcccacggagaacacgtgctgcagaaattcagcagag aagtagaagtaacagcagtgtttcatcacaatctgatgcacccgttcaacgagtaccaactcctcctgctataccgacca gcttccctgatcagggaggcaacattggtattagggcaaacagcaatacagagcaaaactttgtacaacagttggataat gcagtcaacaatgggcagatcactcttgaagaaattgatcaacttcaccgtgaagaattagtccaagaaataagcgaact tgttcacagacagttagtgacaaatactctgcaaggcaatttcagaagtgtattagaacttcaactcagggaaaggcaat cacaaacaggagccgatggacagcggtcagacaactttgataacatctctgttaccagtgtcagtacacaccatgtgcct tatgctcagtcgaatgcttatctaagccgagaaatgcaaagcttaaaggctcaagtcgaggagatgaagaacatgttacg agtcagctttgatttacaacttgatatccagagagctatcagacaggaagtggctgccgctatgtcaaagcatgttgatg gtaattcagcatcagagacggaagccaaatccaagccagtaaacgacacccattgctgtatatgtctagagaagtacgct gactccgtattatatcagtgtggacacatgtgcttgtgctacagctgtggtcgtcaccttatgtcacgaggatcaaagtg tcccgtctgtcgtgctcccatcaaagacattatccgtgcttacaagagcacagaagaatcataa |
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Protein
| Protein ID | pfu_aug2.0_443.1_10780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10780.t1 MAEGGDIPNLSVNSTNMEAQCSSEDDIALMRFLEKSRTDRMYELRQIQHGERPVTSTEHRQSIDHFFSKRLEAQDKAAST GKENVPVNVEDVEEVRPETVVVEIQGLVEQQRVSNVLSTNFRQRLENIIRGSISTVTRNRTPRPSVSPSPSPLQAATPST QSRASTPAEERPVPVPRRTRAAEIQQRSRSNSSVSSQSDAPVQRVPTPPAIPTSFPDQGGNIGIRANSNTEQNFVQQLDN AVNNGQITLEEIDQLHREELVQEISELVHRQLVTNTLQGNFRSVLELQLRERQSQTGADGQRSDNFDNISVTSVSTHHVP YAQSNAYLSREMQSLKAQVEEMKNMLRVSFDLQLDIQRAIRQEVAAAMSKHVDGNSASETEAKSKPVNDTHCCICLEKYA DSVLYQCGHMCLCYSCGRHLMSRGSKCPVCRAPIKDIIRAYKSTEES |
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