Gene
| Gene Model ID | pfu_aug2.0_443.1_10785 |
|---|---|
| Locus | scaffold443.1 : 218687 ... 245620 : - |
| To GenomeBrowser | scaffold443.1:218687..245620 |
| Genes list of scaffold | scaffold443.1 |
| Synonym | pfu_aug1.0_694.1_15186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_443.1_10785.t1 | 1 | 1 | Aminotran_1_2 | 48 | 405 | 0.0 | 173.0 | 0.0 | 0.0 | 172.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_443.1_10785.t1 | gi|564262656|ref|XP_006270204.1| | PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like protein 1-like [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_443.1_10785.t1 | gi|641796651|ref|XP_005308585.2| | PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_443.1_10785.t1 | gi|50732479|ref|XP_418654.1| | PREDICTED: 1-aminocyclopropane-1-carboxylate synthase homolog-like isoform X2 [Gallus gallus] | 0.0 |
| pfu_aug2.0_443.1_10785.t1 | gi|723123049|ref|XP_010291006.1| | PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like protein 1, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_443.1_10785.t1 | gi|697481424|ref|XP_009672620.1| | PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Struthio camelus australis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_443.1_10785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10785.t1 atggcagccctgtcgtctcgagccaaaaaagtccttgaccttcctttggttgccctggagtcaggtagtgttcatgacct aatgagcaaggcaaaatcagtggttgatccagaggacgtaattgatctgggtttggcagaaaataaactatgtgaggaca tcataaatgaaaagttaaaagaatgctaccctacctcaaatagcacacagtactacactactgcttatggcctggaaagt ttgagaaagacatttgctggatttctaacaaggcacatgaaggcagtgaaagaggtggacccagaacagttaatagtgac cactgggtgtacatctttacttggtatagtgtccatgggtatagctgacagtggcgattacattctggtacctgccccct actaccatgcattgacccttgacctttttgcactgggacacctacagataattggggcgcccacagagaatggagtatca ttatcggagagtttggaggcctcttataccaaagcacaatctgagggaaagaaagtgaaagctgttctggtcatgaaccc tacaaatccatctggagaaattttctcgatagaagaaataaaaaaagtcctgaatttttgtcacagatgtagcttacacg tagtgatggatgagatctatggactctcggtattcggggaaagtaaatttgagagtgtttttactttggatatgatccct gatccggaaaggacacattttatgtggggactgagtaaggattttggcatgtctggttatcgtataggagttcttcacag ttggagtaagtcgtttatacaatatgtacggaggattatcgatgccttccaagtaccgacctttatacaactacaaatta acaccttcctatcagatattgactggatagataacgtcctcttacgtacttaccaagacaaacttagatccagtttccag tacaccaaagaaaagttgtcagccatggatgtgtcagtacatcctaaatgccaaggagggctttttgtctgggctaattt ctcaaagcacatgaaaagtaagtcttttgaagaagaagaaaaacttatggcaaagttatatacatcgggagtgtcagtac tgaatggaggatcctttaaaagttccgaacctggatggtttagaatcatatttactactcgtccacatttactagaagaa gctttaaacagaattgaggtagcattaaaacagagctga |
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Protein
| Protein ID | pfu_aug2.0_443.1_10785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10785.t1 MAALSSRAKKVLDLPLVALESGSVHDLMSKAKSVVDPEDVIDLGLAENKLCEDIINEKLKECYPTSNSTQYYTTAYGLES LRKTFAGFLTRHMKAVKEVDPEQLIVTTGCTSLLGIVSMGIADSGDYILVPAPYYHALTLDLFALGHLQIIGAPTENGVS LSESLEASYTKAQSEGKKVKAVLVMNPTNPSGEIFSIEEIKKVLNFCHRCSLHVVMDEIYGLSVFGESKFESVFTLDMIP DPERTHFMWGLSKDFGMSGYRIGVLHSWSKSFIQYVRRIIDAFQVPTFIQLQINTFLSDIDWIDNVLLRTYQDKLRSSFQ YTKEKLSAMDVSVHPKCQGGLFVWANFSKHMKSKSFEEEEKLMAKLYTSGVSVLNGGSFKSSEPGWFRIIFTTRPHLLEE ALNRIEVALKQS |
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