Gene
| Gene Model ID | pfu_aug2.0_445.1_17432 |
|---|---|
| Locus | scaffold445.1 : 28956 ... 43407 : + |
| To GenomeBrowser | scaffold445.1:28956..43407 |
| Genes list of scaffold | scaffold445.1 |
| Synonym | pfu_aug1.0_6367.1_31180 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylosome subunit picln | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_445.1_17432.t1 | 2 | 1 | Voldacs | 250 | 366 | 4.3e-28 | 97.8 | 2.9e-32 | 4.3e-28 | 97.8 |
| pfu_aug2.0_445.1_17432.t1 | 2 | 2 | Voldacs | 396 | 406 | 4.3e-28 | 97.8 | 0.9 | 13000.0 | -4.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_445.1_17432.t1 | gi|291243235|ref|XP_002741509.1| | PREDICTED: methylosome subunit pICln-like [Saccoglossus kowalevskii] | 7.0e-35 |
| pfu_aug2.0_445.1_17432.t1 | gi|632988606|ref|XP_007883203.1| | PREDICTED: methylosome subunit pICln [Callorhinchus milii] | 6.0e-31 |
| pfu_aug2.0_445.1_17432.t1 | gi|602663442|ref|XP_007437352.1| | PREDICTED: methylosome subunit pICln isoform X2 [Python bivittatus] | 5.0e-30 |
| pfu_aug2.0_445.1_17432.t1 | gi|363729424|ref|XP_423253.3| | PREDICTED: LOW QUALITY PROTEIN: methylosome subunit pICln [Gallus gallus] | 1.0e-29 |
| pfu_aug2.0_445.1_17432.t1 | gi|719770000|ref|XP_010218901.1| | PREDICTED: methylosome subunit pICln [Tinamus guttatus] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_445.1_17432.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17432.t1 atgcctcctcttctgcagctgcagattactctcgcaattgtgttgtcccttgcttaccttaaaccagaaaatgtctggct gaatgatcatgtgacagacccagggatgtcccgggattcgggacatgtacatgtcaatactgtcattcataactatctac acattcataaccatggtacagatagctcatttgcatttagcatgacaacaccattcaatgaggtggacaaccagtcaagc aaacaaaactttggtcctttgtgtagtgacaaaataatctcacttaaagtgttcttaaacatgactcgcaaaaggttccc tagccaattaccaaaaccatctaaatcactgcttttcctcctcctcctcataattgctcgatctaatgacattgaaacca acccaggacctagtaatgacagcacaaagtacatgtgtggtacatgcgacaacactgtaacctgggaacataaaggaaca gaaacctggcttgaaccagaaattaaaaacaatgaagttttccctagtagttataaggtgtataggagagataggaaagg gaagcaaggtgggggtgtcctcatcgcagtcaaggataactttattagtgatgaagttgaagacttgtcaccagatgaca agtgcgagatgatctgggctaaagttgaaattgttggctgtaggaccctatatgtttcattattttataaccccaaaact tctgatgaacaaagcctcaaatgcttggtatcctggaggacaaatgaaggtcaggggttttgccttttgtatccaaagat aagtctccatgcagtgtcaagagatctcaatgcatttccacaggagtgcttgtttttgatggtagatgggaagctagata gtgaagttcgtaggggcagcgagtcgtctgaggaagaatcaggctatgatgaaccaacttcagaagtccgatttattcct actgacaaaggggcattggatgccatgttcagtgctatgtcagactgccaagctctacatcctgatgaacaagatacaga ctctgatgctgaagattttgaagctaattattacgagggtgaggagggtgtagaggaattatcagaacaaggtcagcgaa cgttacaacatctagagaacttactaatcaatggtcaaggagatggtcagccatctacaacagatcaacaaaatggagac acagatgaaaggtttgaagatgctgacaacatggaacattaa |
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Protein
| Protein ID | pfu_aug2.0_445.1_17432.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17432.t1 MPPLLQLQITLAIVLSLAYLKPENVWLNDHVTDPGMSRDSGHVHVNTVIHNYLHIHNHGTDSSFAFSMTTPFNEVDNQSS KQNFGPLCSDKIISLKVFLNMTRKRFPSQLPKPSKSLLFLLLLIIARSNDIETNPGPSNDSTKYMCGTCDNTVTWEHKGT ETWLEPEIKNNEVFPSSYKVYRRDRKGKQGGGVLIAVKDNFISDEVEDLSPDDKCEMIWAKVEIVGCRTLYVSLFYNPKT SDEQSLKCLVSWRTNEGQGFCLLYPKISLHAVSRDLNAFPQECLFLMVDGKLDSEVRRGSESSEEESGYDEPTSEVRFIP TDKGALDAMFSAMSDCQALHPDEQDTDSDAEDFEANYYEGEEGVEELSEQGQRTLQHLENLLINGQGDGQPSTTDQQNGD TDERFEDADNMEH |
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