Gene
| Gene Model ID | pfu_aug2.0_445.1_17433 |
|---|---|
| Locus | scaffold445.1 : 46683 ... 52385 : - |
| To GenomeBrowser | scaffold445.1:46683..52385 |
| Genes list of scaffold | scaffold445.1 |
| Synonym | pfu_aug1.0_6367.1_31181 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysine-specific demethylase 6a-like | GO:0046872 GO:0071557 GO:0071558 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_445.1_17433.t1 | 1 | 1 | JmjC | 410 | 518 | 3.9e-33 | 114.0 | 1.4e-36 | 1.0e-32 | 112.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_445.1_17433.t1 | gi|676491369|ref|XP_009065570.1| | hypothetical protein LOTGIDRAFT_132923, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_445.1_17433.t1 | gi|380019796|ref|XP_003693788.1| | PREDICTED: histone demethylase UTY-like [Apis florea] | 0.0 |
| pfu_aug2.0_445.1_17433.t1 | gi|572268932|ref|XP_006612498.1| | PREDICTED: lysine-specific demethylase 6A-like [Apis dorsata] | 0.0 |
| pfu_aug2.0_445.1_17433.t1 | gi|571552378|ref|XP_003250079.2| | PREDICTED: histone demethylase UTY-like [Apis mellifera] | 0.0 |
| pfu_aug2.0_445.1_17433.t1 | gi|383863015|ref|XP_003706978.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_445.1_17433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17433.t1 atgtctgtagcatcatcagctcagggaggtactttaccactgtcatcatcatcacatcatgacagcctggacaggatcgg agacacagcgacaagcgataccgaaggactgccaaaagaaattcaaaaatttgtttccgatcacttgaatgatagggatt taaatgctcttgactatgctacctctattgctgaagacttactttctcagtttacacaaagtcagaacactagcaaatct gaggtgaactctcaacagaatgtgcattctagtcaaaaagagaagtccttatctaacagtggggataattcattaccgac atcccacgctagtcccagcaaactttcgtccagtgtacattccatgaattctcaggagacaagtcgtaccgaacctagaa tagaccccaccaaagtggaatatagtgtcaagtgtgatagtgaaaatgtgaataagcttgtcatatctcggaatatacca aggagtctaacacctcctaatgcacctttcaacatatccattaccatgaagggcagagaagttttagcagcttgtaaagg ctatggtaaaagaggaataacgacaagtttacttggagataaaggtcccccacgaccccctagtccaccctatccaccac tggccaaggaaaatctcaacccaccaacacccagtgtatatcttgaaacaaagaaagatgctttctccacagagctacaa caatactgttattcccagccagtggttgttatacggggtctggctggagcgttaaaactcgatcttggtctcttctcaac aaaaagtttggtagaggcaaacgctgaccatccagtagaagtcagaacacagaaacagcaagctccagatgagaatcgag atgcttatggtaacaagttatggcggtgtgatagcagcaggggaagaacaacgatagctaaatacgcacaatatcaggct tcttcatttcaagagtctctcagggaggagagtgaacgtgcaaggggaatacacaaagactcagatagtgattccaattc atcagggggtcctaaagggaaaaagaagaagacgatcaaatttggtacaaatgtggacctttctgatgagaagaagtgga agactcagctacaggagttgtctaaattacccgcgtttactcgagtagtgtcggcgagtaacctactgagtcatgtaggg aacactatactgggaatgaataccgtacaactctatatgaaagttccaggatcaagaacaccaggacatcaggaaaacaa caatttttgctcaatcaacatcaacataggccctggggactgtgaatggtttggtgtaccagaatcgtactggggagtca ttcataatatgtgtgaaaggaataacatcaactacctaactgggtcatggtggcctattttagaggatttatatgaggaa aatgtgcctgtttacaggtttatacagaaacctggggatctcgtgtgggtgggacctggtacaatacattgggtacaagc tgtgggatggtgtaataacatagcatggaacgttggtccagtgaatgccaggcagtttcagttggccttggaacggtacg agtggaacaagttacagagctataaatctattgtccctatgatccatttgtcgtggaacattgctagacatattaatata gctgaaccaaagctgtttgaacaaatcaagtcttgtttgatgaggtcgttgcgacagattcgctttacgttggattttat tgaagagatgggactggaggtaaaatggcatggaaggtctgaaaacgaggcagcacactattgtaacgattgtgaggtag aagtatttgacctgctgtttgtggtggagcaggataagaagtttgtcgtgcactgtcaggaatgtgcccgtaaaatcagt accaggatggaggggtttgttgtgcttgaacagtaccaactagcagaactctgtgaaatatacgataggtttcaactctc acatatggttccatctagctga |
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Protein
| Protein ID | pfu_aug2.0_445.1_17433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17433.t1 MSVASSAQGGTLPLSSSSHHDSLDRIGDTATSDTEGLPKEIQKFVSDHLNDRDLNALDYATSIAEDLLSQFTQSQNTSKS EVNSQQNVHSSQKEKSLSNSGDNSLPTSHASPSKLSSSVHSMNSQETSRTEPRIDPTKVEYSVKCDSENVNKLVISRNIP RSLTPPNAPFNISITMKGREVLAACKGYGKRGITTSLLGDKGPPRPPSPPYPPLAKENLNPPTPSVYLETKKDAFSTELQ QYCYSQPVVVIRGLAGALKLDLGLFSTKSLVEANADHPVEVRTQKQQAPDENRDAYGNKLWRCDSSRGRTTIAKYAQYQA SSFQESLREESERARGIHKDSDSDSNSSGGPKGKKKKTIKFGTNVDLSDEKKWKTQLQELSKLPAFTRVVSASNLLSHVG NTILGMNTVQLYMKVPGSRTPGHQENNNFCSININIGPGDCEWFGVPESYWGVIHNMCERNNINYLTGSWWPILEDLYEE NVPVYRFIQKPGDLVWVGPGTIHWVQAVGWCNNIAWNVGPVNARQFQLALERYEWNKLQSYKSIVPMIHLSWNIARHINI AEPKLFEQIKSCLMRSLRQIRFTLDFIEEMGLEVKWHGRSENEAAHYCNDCEVEVFDLLFVVEQDKKFVVHCQECARKIS TRMEGFVVLEQYQLAELCEIYDRFQLSHMVPSS |
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