Gene
| Gene Model ID | pfu_aug2.0_445.1_17436 |
|---|---|
| Locus | scaffold445.1 : 104907 ... 135525 : - |
| To GenomeBrowser | scaffold445.1:104907..135525 |
| Genes list of scaffold | scaffold445.1 |
| Synonym | pfu_aug1.0_205.1_22082 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_445.1_17436.t1 | 2 | 1 | AAA_22 | 467 | 606 | 5.0e-09 | 36.3 | 3.0e-11 | 5.0e-08 | 33.1 |
| pfu_aug2.0_445.1_17436.t1 | 1 | 1 | NACHT | 467 | 613 | 1.4e-08 | 34.5 | 1.6e-11 | 2.7e-08 | 33.6 |
| pfu_aug2.0_445.1_17436.t1 | 2 | 2 | AAA_22 | 675 | 738 | 5.0e-09 | 36.3 | 0.64 | 1100.0 | -0.3 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 1 | WD40 | 1136 | 1160 | 2.1e-20 | 71.7 | 0.08 | 130.0 | 2.6 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 2 | WD40 | 1240 | 1257 | 2.1e-20 | 71.7 | 0.69 | 1100.0 | -0.4 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 3 | WD40 | 1336 | 1370 | 2.1e-20 | 71.7 | 1.1e-05 | 0.019 | 14.8 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 4 | WD40 | 1445 | 1463 | 2.1e-20 | 71.7 | 2.6 | 4200.0 | -2.2 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 5 | WD40 | 1486 | 1509 | 2.1e-20 | 71.7 | 7.7 | 13000.0 | -3.7 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 6 | WD40 | 1583 | 1605 | 2.1e-20 | 71.7 | 1.1e-05 | 0.017 | 14.9 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 7 | WD40 | 1620 | 1646 | 2.1e-20 | 71.7 | 2.2e-05 | 0.036 | 13.9 |
| pfu_aug2.0_445.1_17436.t1 | 8 | 8 | WD40 | 1654 | 1688 | 2.1e-20 | 71.7 | 4.3e-06 | 0.0071 | 16.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_445.1_17436.t1 | gi|658844599|ref|XP_008404720.1| | PREDICTED: NACHT and WD repeat domain-containing protein 1 isoform X1 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_445.1_17436.t1 | gi|657739845|ref|XP_008336080.1| | PREDICTED: NACHT and WD repeat domain-containing protein 1 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_445.1_17436.t1 | gi|617521026|ref|XP_007544460.1| | PREDICTED: NACHT and WD repeat domain-containing protein 1 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_445.1_17436.t1 | gi|658844601|ref|XP_008404721.1| | PREDICTED: NACHT and WD repeat domain-containing protein 1 isoform X2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_445.1_17436.t1 | gi|524890402|ref|XP_005101748.1| | PREDICTED: uncharacterized protein LOC101864694 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_445.1_17436.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17436.t1 atggattctgaagtgagaggggtgtttcaaggaagtcttgaggatcctccacaagaggaatcctctgacattatcctttt cttcagttcaacttttactgatatgacaaatgagaggaactttatcctgaatgatattgtaccagacctcaggcttcact gctttcgacgaggacttgattttcaggcaatagacatgagatggggagttagagacgatgcctccattgaccacaccaca actgagattgttctgaatcaagttgaatacagtaaacaaaactcaaaaggacctttctttgtgtcttttctcggagatag atatggttcaaggattctgcctccatatattgatgccaaggaatacaaactactgagaagaatcgccatgaagctaggtt atgatgtaacggtaatggaccagtggtttgcacgtgatgacaatgctgaaccatctgtttattacttccgaagtatcact gatattctgaaatattacgatgatgattctcccgaaaattcaaaagctcgagaaaaggacaggaagaaatgggatgatga taacgataaattactacagatgtttcgaggggcagcacagtacgcctatgatgaaaaactcatttccagggaagctaaac atatatactataagtcagtgacagaggctgaagttgaggagggcatattacatacctcaaatatcaaggactgtgtcatg gtatacgagcgtaccctacaaaatatcgatctcaaagatagtaaagcaggaaggttcattgacatgattgatggagatat tgacaaagaagcaaaggatctgagagagagactgaaaataacaaaggtagagccaaaagttggacccagggaactcagaa aattcactgttgactggagaccaggaggtatcgacccagagtatgaacctcataaacaatatcttagcgacctgagcgag gacttcagagttcgttctatccgcatgatcgactcatgtatagaaaagggtaaagtgaagaaggcaggaattcatcattt gttatacacagaagtactcagtcatctgaggtttgccaagatgaagagtgaaatattctgtggacgagatgagctactgg aggacatcttccaacgatttactcttgtcttttcttggaaaagtttgggtgaagaaaatgagaaaaaagaaaactcagac acgattgagctagtaacaccatctgttcagatggaacctgattcataccgtaaggagatgaaagagacacaggagcatct caaggccattggagtccatttcagctcaggtgaccttgataatgacctagattcagatcccaatagaaatatgaaggagg aagccatcatgttaccgcctataatgaccttcagttatccagttgtactttatggggagtcaggttcaggtaaaacctcc gtcatggcaaagctggcatacaaggtccaggagtggtaccctggctgtgtatctgttattcgtttcatgggaacaagccc cttgtcatcggccatcaaaaccaccctgctgagtgtctgtgcccagatcagcatcatgtacgggattcctcccatggccc cgggggatctggagggggactaccagtacctctgtaagtacttcacagcactgctatggaggatcaatactaaggacaaa cccctggtcattatactggactctgtcgatcagctaagctgtgtggacaatccacataacatgaagtggattccgtgcca tctgccaactaatgtccatatggtggtgtctatggtaccaaacattcacaactgtctggaaaatatgttgtcttactttc ctcactgtgatatgtttgtggagatccccttgctgacctctgatgtggcagaggacatcattacacaaacttgtcggcat aaaaatcggaggcttacaaggttacagacgaggttcatcgtggagaagttcaccagctcaccttacccactttacttaaa gctcctactggaccaagctttgatgtggaagtcaaacactgtagttacagatatacaagtaggggacagtataagggaag ccatcaacaaaatctttgatggtctggaaagcaaacatggagtagttctcattcagaaattcatgagagctttggctgct tgtcgtatgggtatcagtaaatccgaggtagaagatgtgctctcattggacgatgaagcgctacaggatacgtacttgta tcaccttcctcctaaccccgaaaagatccgtatcccgttctctgtcttaactctccttatagaggaccttaaggaataca tcgtaacacaaaaggcagggcatatgaagattttatcatggtatcatagacattttgcggaggcttgtatggagagatac ttccctaacaattgtaggaaagctactcataccttgttagcagaatattttgagggttattggtatgaacgagtgaaacc actagagctgtacaaagtaaagaaaggttcattcccagatgccgtcaggaatgttcagccgcagccaatcagatggaaaa accattacaacatcaggaaactgtacgagtatccttatcacctgataatgagtggccagtttgagaagtatgtggaggat tgtgtatgtaactttgatttcctgtatgcacaaatcaaagtcctacaactcggatcggcattcaacgatctaaaactggc catgtctaccatggatgaacatggtgatatagggacgtcatattctgatatagaaactgtttataacatgatcagcttgg atgcagactgtataagaaaggaagtgaatcagctggcaactcagattttgagtagacttggaccaaagtattctggctct aaacacataggacagctagtttgtggtgccatgacgtggattaaggacggagatgtatctgtcttgtatcctaacatgtg ctgtgctccgtcaccaggaggactcgtcaaaaccacattctctgcagctgtcaagtataaaggagataactttggtgtga actatggtcatgttatgtgcctagacgagaaaacggaccaactgacagtcattaataagtctgacacacagaaagcagac gaacttattacatacagcctgagtgacaatggaagcagtacatactcaaagaaaatgttaaaagtgtacagcgcaatttg gatgtactgtgataacaaatatgtacatttggttgatgatactgtgaataaggaagagctttatgagtctgcctcctaca gggccgtgcagttcccctacccacaggatgccattaccatctcacaatcaggaaatctgctcgtattctcatcagtttca aagatatatgtatgcaagattggcaagtccattcatgatttgactcccatgcagacgttagaatgtgatggatcccctgt gaaggcagtgcttatctcccctgatgagaagtttattgttgcggttattgcgaaagagatgaatgttgccatatttgaca ttaaaacaggactgaaaattcacgaaaaaaaaagtgaggagaaatttttcgtgcaggaagtccctaaatcgcttatcaag caggtctccatgattacaaaagacaataaactgattgtgaaaagctgtaaagccatattactggtagaattagacactgg ggaaagcgctgttgtccagccatttgatacatatgacttgaatgtagtatctgtacatccagcagagaaatttgtagcgg taggttcaagcaccacttttaccatgtctccgggacctgaaaagcaatggaaagtatgggacacgtctaccaagcaaatt gtcagtaaagctcacgaacacctttacaacagttgtggagtggagaacctgacattgtttggtaaggatgatttgtttgt agccttgacgatgcactataacacacctgtgtttctggcctaccttggaaccctgtcctgtcctataccagaggccatac cataccggcagctgattggtcacagtgataatgtcctccagctactcctcaggtcagatcacagcctcctgatcactgct gctgaagacaacaggatcattgtatgggacgtcagtaagataacgacagaattctccaccaagtacggccaacaaccaga ccagaccaaagtactgcatgactatgaaacagaactgaaggaagaatcaaatactttacattttgccattgggagagatg ataagcacgtctacatgggtacatcaggtggtcagcttatagtacatgaccttgagggtcacaccataaccaagaaggta gaggtagaggagaagggacctataaactttgtccttgtctctaagaatggatccttcattatcacagctccaaagaaatc ccacggtggaaaaaatgtcaccataaagatatggaattcatcttcttatgaccttgtccatgaccttgaacataggagtt ctcagctgacatgtcttgctgaggccaatgatatccttgtatcagggcagtgtggtatggaagccaaggcatgtgtatgg gatatcaaaacaggagaagtactgaaaacatttgagctgctctattctctgtacaatgtagccattgattctaaaggcag aatggttgtatcaacattcttcgagttccctatcgtcattcctgtagaaggagagaatcaagggggatatgacatgtcaa agatggattgtttaatgagctcaccaacttgtctagatatcagtcctgatgatcagtatgctctatgtggatccacagat ggacagatacgtgtcattcagctgccgggcgaatacaaatatcgcatggctcagaaatcttctgttattgcagctaaatt ctctcctgatggacagtacataatgtccacaggattcaagtctgtgtatatatggaacttgaaggacgggaatctgaggt tcaaacttaaaaaacataatgattttgttgtcaatattcagtttgacgcactaggcaagtacatgataacatctggcagg gataaaaagatcgtgtactgggatgtgagcacatttatctcccttgcttctttctacagtcactgtcaggtagaccaaat aggcttgacctccgatggtaacaaggtcatatatgtaccagaaaatgtaggtcacatagcagtgctgtccccaaacaata aactgcagcaggtcaaacagaagaaaggagtttccctaaaacatgaagtactgaaggcacaagctatggctttgtcattc tccagtcaaagactggtatcggaaccaagaatgtcaagtgcttgnataccagaaaatgtaggtcacatagcagtgctgtc cccaaacaataaactgcagcaggtcaaacagaagaaaggattttccctaaaacatgaagtactgaaggcacaagctatgg ctttgtcattctccagtcaaagactggtatcggaaccaagaatgtcaagtgcttgttctgtcatgtga |
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Protein
| Protein ID | pfu_aug2.0_445.1_17436.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17436.t1 MDSEVRGVFQGSLEDPPQEESSDIILFFSSTFTDMTNERNFILNDIVPDLRLHCFRRGLDFQAIDMRWGVRDDASIDHTT TEIVLNQVEYSKQNSKGPFFVSFLGDRYGSRILPPYIDAKEYKLLRRIAMKLGYDVTVMDQWFARDDNAEPSVYYFRSIT DILKYYDDDSPENSKAREKDRKKWDDDNDKLLQMFRGAAQYAYDEKLISREAKHIYYKSVTEAEVEEGILHTSNIKDCVM VYERTLQNIDLKDSKAGRFIDMIDGDIDKEAKDLRERLKITKVEPKVGPRELRKFTVDWRPGGIDPEYEPHKQYLSDLSE DFRVRSIRMIDSCIEKGKVKKAGIHHLLYTEVLSHLRFAKMKSEIFCGRDELLEDIFQRFTLVFSWKSLGEENEKKENSD TIELVTPSVQMEPDSYRKEMKETQEHLKAIGVHFSSGDLDNDLDSDPNRNMKEEAIMLPPIMTFSYPVVLYGESGSGKTS VMAKLAYKVQEWYPGCVSVIRFMGTSPLSSAIKTTLLSVCAQISIMYGIPPMAPGDLEGDYQYLCKYFTALLWRINTKDK PLVIILDSVDQLSCVDNPHNMKWIPCHLPTNVHMVVSMVPNIHNCLENMLSYFPHCDMFVEIPLLTSDVAEDIITQTCRH KNRRLTRLQTRFIVEKFTSSPYPLYLKLLLDQALMWKSNTVVTDIQVGDSIREAINKIFDGLESKHGVVLIQKFMRALAA CRMGISKSEVEDVLSLDDEALQDTYLYHLPPNPEKIRIPFSVLTLLIEDLKEYIVTQKAGHMKILSWYHRHFAEACMERY FPNNCRKATHTLLAEYFEGYWYERVKPLELYKVKKGSFPDAVRNVQPQPIRWKNHYNIRKLYEYPYHLIMSGQFEKYVED CVCNFDFLYAQIKVLQLGSAFNDLKLAMSTMDEHGDIGTSYSDIETVYNMISLDADCIRKEVNQLATQILSRLGPKYSGS KHIGQLVCGAMTWIKDGDVSVLYPNMCCAPSPGGLVKTTFSAAVKYKGDNFGVNYGHVMCLDEKTDQLTVINKSDTQKAD ELITYSLSDNGSSTYSKKMLKVYSAIWMYCDNKYVHLVDDTVNKEELYESASYRAVQFPYPQDAITISQSGNLLVFSSVS KIYVCKIGKSIHDLTPMQTLECDGSPVKAVLISPDEKFIVAVIAKEMNVAIFDIKTGLKIHEKKSEEKFFVQEVPKSLIK QVSMITKDNKLIVKSCKAILLVELDTGESAVVQPFDTYDLNVVSVHPAEKFVAVGSSTTFTMSPGPEKQWKVWDTSTKQI VSKAHEHLYNSCGVENLTLFGKDDLFVALTMHYNTPVFLAYLGTLSCPIPEAIPYRQLIGHSDNVLQLLLRSDHSLLITA AEDNRIIVWDVSKITTEFSTKYGQQPDQTKVLHDYETELKEESNTLHFAIGRDDKHVYMGTSGGQLIVHDLEGHTITKKV EVEEKGPINFVLVSKNGSFIITAPKKSHGGKNVTIKIWNSSSYDLVHDLEHRSSQLTCLAEANDILVSGQCGMEAKACVW DIKTGEVLKTFELLYSLYNVAIDSKGRMVVSTFFEFPIVIPVEGENQGGYDMSKMDCLMSSPTCLDISPDDQYALCGSTD GQIRVIQLPGEYKYRMAQKSSVIAAKFSPDGQYIMSTGFKSVYIWNLKDGNLRFKLKKHNDFVVNIQFDALGKYMITSGR DKKIVYWDVSTFISLASFYSHCQVDQIGLTSDGNKVIYVPENVGHIAVLSPNNKLQQVKQKKGVSLKHEVLKAQAMALSF SSQRLVSEPRMSSAXIPENVGHIAVLSPNNKLQQVKQKKGFSLKHEVLKAQAMALSFSSQRLVSEPRMSSACSVM |
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