Gene
| Gene Model ID | pfu_aug2.0_445.1_17439 |
|---|---|
| Locus | scaffold445.1 : 178032 ... 196610 : + |
| To GenomeBrowser | scaffold445.1:178032..196610 |
| Genes list of scaffold | scaffold445.1 |
| Synonym | pfu_aug1.0_21.1_21912 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methionine-r-sulfoxide reductase mitochondrial | GO:0008152 GO:0016671 GO:0043231 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_445.1_17439.t1 | 1 | 1 | SelR | 229 | 349 | 0.0 | 170.3 | 0.0 | 0.0 | 169.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_445.1_17439.t1 | gi|676444910|ref|XP_009050583.1| | hypothetical protein LOTGIDRAFT_158925 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_445.1_17439.t1 | gi|395852099|ref|XP_003798579.1| | PREDICTED: methionine-R-sulfoxide reductase B3 [Otolemur garnettii] | 0.0 |
| pfu_aug2.0_445.1_17439.t1 | gi|313760640|ref|NP_001186507.1| | methionine-R-sulfoxide reductase B3, mitochondrial [Gallus gallus] | 0.0 |
| pfu_aug2.0_445.1_17439.t1 | gi|514768937|ref|XP_005025041.1| | PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial isoform X3 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_445.1_17439.t1 | gi|395537970|ref|XP_003770961.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_445.1_17439.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17439.t1 atgatcatgaatcctcatagatttgttccccatgagtcaagatcaagtttagtatggcacggatatgccgatatatttct ggaccagaaactgccagtaacaattctgagtggtgaattaggtgacattgatgctgagtttgaaaatgactaccaaccag ttcccaaaaagatgaaaattgacaaagatgttgcctctagcagtgatgcaagtgaaaatgttggtgaacattcatcaggc agaccagtggcatctacatcaaacaaagcaaagaatgaaacagctatggaaggattatgtgtggaagtgaaaaataaagt ttcagacgatgtcctacttagcttgaatgtaatagatcagattatagctgaaacaatcactaatgctttcgtgcaggtag ttaaaactgcattaaaaaatagaaaaaggcccaaacctccaggtcgaatcctctctggtccgaacaaggaaagggccaaa acctctggcaaccttacaaaaaaccatagtaagggaacacagcatatgcatgtaggcttggtgatcagacagttgttgtt ggcctctgtggggatgaacatcctacatgctgtgacggcagggaggaaggaggcgtcgcccaaactaaagaagctacaga attcctgccaggaggagggggtgtgtcctgtcactatacccaaggaggatctgaaagagaagcttacaccattacagtat catgtcactcaggaacaaggcactgagagagccttctcaggaaaatatgtgaacaacaaagaggagggtgtgtacacatg tgtagtgtgtggtaacaagttattctcgtctgataacaagtacgactccaagtctggctggccatccttctacgatgtcg tggacaagagtcacatacgtatcacagatgatacttcacatgggatgagaagagaggaagtgacatgctcttggtgtgga gcccacttaggtcatgtgttcaatgatggtccccaccccacaggccagcgatactgcatgaactctgctgcactcaactt tatccctgcccagaacagcaaggggaaacaacccaaagtcaaatctgaactttga |
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Protein
| Protein ID | pfu_aug2.0_445.1_17439.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17439.t1 MIMNPHRFVPHESRSSLVWHGYADIFLDQKLPVTILSGELGDIDAEFENDYQPVPKKMKIDKDVASSSDASENVGEHSSG RPVASTSNKAKNETAMEGLCVEVKNKVSDDVLLSLNVIDQIIAETITNAFVQVVKTALKNRKRPKPPGRILSGPNKERAK TSGNLTKNHSKGTQHMHVGLVIRQLLLASVGMNILHAVTAGRKEASPKLKKLQNSCQEEGVCPVTIPKEDLKEKLTPLQY HVTQEQGTERAFSGKYVNNKEEGVYTCVVCGNKLFSSDNKYDSKSGWPSFYDVVDKSHIRITDDTSHGMRREEVTCSWCG AHLGHVFNDGPHPTGQRYCMNSAALNFIPAQNSKGKQPKVKSEL |
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