Gene
| Gene Model ID | pfu_aug2.0_445.1_17442 |
|---|---|
| Locus | scaffold445.1 : 273139 ... 274051 : - |
| To GenomeBrowser | scaffold445.1:273139..274051 |
| Genes list of scaffold | scaffold445.1 |
| Synonym | pfu_aug1.0_21.1_21917 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_445.1_17442.t1 | 1 | 1 | PID_2 | 19 | 152 | 1.6e-22 | 80.0 | 8.4e-26 | 2.1e-22 | 79.6 |
| pfu_aug2.0_445.1_17442.t1 | 1 | 1 | PID | 19 | 144 | 2.2e-13 | 50.3 | 1.6e-16 | 3.9e-13 | 49.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_445.1_17442.t1 | gi|676491345|ref|XP_009065562.1| | hypothetical protein LOTGIDRAFT_236435 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_445.1_17442.t1 | gi|260796377|ref|XP_002593181.1| | hypothetical protein BRAFLDRAFT_209933 [Branchiostoma floridae] | 6.0e-20 |
| pfu_aug2.0_445.1_17442.t1 | gi|147898522|ref|NP_001085882.1| | MGC80983 protein [Xenopus laevis] | 3.0e-19 |
| pfu_aug2.0_445.1_17442.t1 | gi|148236747|ref|NP_001090242.1| | uncharacterized protein LOC779147 [Xenopus laevis] | 4.0e-19 |
| pfu_aug2.0_445.1_17442.t1 | gi|166158242|ref|NP_001107499.1| | protein FAM43A [Xenopus (Silurana) tropicalis] | 4.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_445.1_17442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17442.t1 atgttcaacagtgctactaaggtccgtgcaagtataaccgagacagacccagtcttcaaaggacgttatttgggatttac agagacttttgtcgccagcggaacagggtgtacaataaaacatgttcagactatgtgggacaacgctggttctgaaaagc atatgaaaaaagttgtactcgtcttgaacacttctggaattttgatgaaagaagagggtaagaagaaggataaaggacaa cattttcccatagaaaatatttcattttgtaacgcagatgcaaatatcgaaagagtgttcagttggatatgtaaggaaga ggacagtcccaaactgctgtgtcatgccatattgtgcagtgatagcgagggcgcaaaagcaatgtcgcttgttatgtcac gtgcttttcaaatagcttataaggaatggaaaactcataaatctcgagagctgagagaaagccgaaaaggaaaagtgccg gagcaaattatccgaaagcaaagcaacaattctgtactgacagaggacacagtctcggcgagtggtagtgaacacgagtc agagtcgggattcagtggaattggaaaaactttgtcagaaagaaaggaatcagagaatcaaactgatattgacaatgtat ctagcattctaaggtcttctttgaatatgaatggttcactatcagaaaaccaatcctaa |
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Protein
| Protein ID | pfu_aug2.0_445.1_17442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_445.1_17442.t1 MFNSATKVRASITETDPVFKGRYLGFTETFVASGTGCTIKHVQTMWDNAGSEKHMKKVVLVLNTSGILMKEEGKKKDKGQ HFPIENISFCNADANIERVFSWICKEEDSPKLLCHAILCSDSEGAKAMSLVMSRAFQIAYKEWKTHKSRELRESRKGKVP EQIIRKQSNNSVLTEDTVSASGSEHESESGFSGIGKTLSERKESENQTDIDNVSSILRSSLNMNGSLSENQS |
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