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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_445.1_17443
Locus scaffold445.1 : 283772 ... 307751 : +
To GenomeBrowser scaffold445.1:283772..307751
Genes list of scaffold scaffold445.1
Synonym pfu_aug1.0_115.1_07384

Manual annotation
Annotation by Blast2GO
Annotation GO
f-box-like wd repeat-containing protein tbl1xr1 GO:0004402 GO:0016573

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_445.1_17443.t1 gi|676440000|ref|XP_009049033.1| hypothetical protein LOTGIDRAFT_225956 [Lottia gigantea] 0.0
pfu_aug2.0_445.1_17443.t1 gi|241644679|ref|XP_002411077.1| WD-repeat protein, putative [Ixodes scapularis] 0.0
pfu_aug2.0_445.1_17443.t1 gi|642917151|ref|XP_008191139.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 [Tribolium castaneum] 0.0
pfu_aug2.0_445.1_17443.t1 gi|260796387|ref|XP_002593186.1| hypothetical protein BRAFLDRAFT_57930 [Branchiostoma floridae] 0.0
pfu_aug2.0_445.1_17443.t1 gi|242005598|ref|XP_002423651.1| conserved hypothetical protein [Pediculus humanus corporis] 0.0

Transcript
Transcript IDpfu_aug2.0_445.1_17443.t1
Definition-
>pfu_aug2.0_445.1_17443.t1
atgttttccagtagattacatactatgaggggtggacagggtcaaaggggggaggagaaggaaaggggcgggaagaggga
gggaggaaaatcagaaaccgaaagcatacaaaatcaggacaaaacaggaaccaaagcaaacaaacaaaaacctccacctt
atgaaaagaagcgaactcccgatatgggagtgagaccaggtgcccaggaagaatcaggttctcaaggggttacagggttt
gtccactctgcttacacgtttggtattgagagtcacatcagccagtcaaacatcaatggagcgctagtacctccggctgc
actactcaacatcatacagaagggactgcagtacaccgaggcagaaatcagcataggagaggatggttcccagaagaata
ttgaggctttatcccttattgacgccgtgatgccagatgttgtggaatccagaaagcaggctgctcaaccacagcaaaaa
gtcaaaacagaaaccactagcactaacggcgaggaagccggacaagctgtagcaaatcacagtgaagggatggaagtaga
tggtctagaaattcccagcagcaaagcaactgtactgagaggacatgagtcagaggtcttcatctgtgcttggaatccaa
caaatgaccttttggcctcagggtga

Protein
Protein IDpfu_aug2.0_445.1_17443.t1
Definition-
>pfu_aug2.0_445.1_17443.t1
MFSSRLHTMRGGQGQRGEEKERGGKREGGKSETESIQNQDKTGTKANKQKPPPYEKKRTPDMGVRPGAQEESGSQGVTGF
VHSAYTFGIESHISQSNINGALVPPAALLNIIQKGLQYTEAEISIGEDGSQKNIEALSLIDAVMPDVVESRKQAAQPQQK
VKTETTSTNGEEAGQAVANHSEGMEVDGLEIPSSKATVLRGHESEVFICAWNPTNDLLASG

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