Gene
| Gene Model ID | pfu_aug2.0_4465.1_19312 |
|---|---|
| Locus | scaffold4465.1 : 30226 ... 41359 : + |
| To GenomeBrowser | scaffold4465.1:30226..41359 |
| Genes list of scaffold | scaffold4465.1 |
| Synonym | pfu_aug1.0_3558.1_08661 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4465.1_19312.t1 | 4 | 1 | Cpn60_TCP1 | 15 | 134 | 1.6e-08 | 33.6 | 1.8e-10 | 2.7e-06 | 26.2 |
| pfu_aug2.0_4465.1_19312.t1 | 4 | 2 | Cpn60_TCP1 | 312 | 406 | 1.6e-08 | 33.6 | 0.14 | 2100.0 | -3.1 |
| pfu_aug2.0_4465.1_19312.t1 | 4 | 3 | Cpn60_TCP1 | 629 | 720 | 1.6e-08 | 33.6 | 0.0026 | 38.0 | 2.7 |
| pfu_aug2.0_4465.1_19312.t1 | 4 | 4 | Cpn60_TCP1 | 851 | 889 | 1.6e-08 | 33.6 | 0.0022 | 32.0 | 2.9 |
Transcript
| Transcript ID | pfu_aug2.0_4465.1_19312.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4465.1_19312.t1 atgaacaggtgtaagattggtattgaaaatggcatccagtgtttggtggatgacaatgatgtggcgtatataacagatac cataaccttacttcagtctttagatttaaaacatcctgtggatcagtacgtactgtctgtttgtcagtcattccatcaga gccatcatcacggagtgaagacgttactgtatatgatacaggccttggtgaaagcagcctccattctgaaagaacagggt gtaccattgagttatatcaggagacacatgtgtgaaggtatagacatatgtagtgaacatgccgatgccatcaaattacc tatccagcttgaactaaatgatggaaaagaggtaagaaaaccagttattctacagaaaaatgataatttggagagtaaac aaccaaagaatcttcatgtagatcacagaaatacgacatttgaatctcaacagccaattataaaccttgaaatgagagag aaaaccacaaaatatcacaataatgactttaatgatgaagaggatgacgacgatgatattagctggtattttcaaagcaa tgatttatcaggggggaaaactgatgatagtttacctaccaagttaaataaaacattatcaataaatcatatgaaaatag actctgaggatgatgtgacaattacgtctcttaggcaaaattcagacacagactcagattttgacgattgttttgaggga attcctgcgtatagtaaggttatagatggaatgtctaccaaacatacttcatctaatagcagggaatcttcacgcttatc taatattacatacagtgcgaaggaacatctaacagagaacggcaagtacagcacatctgcagaaatggctggagataagg gcaaaagaattgacgtcgcatcaagtactctcaacacagaggctctgtttgaccaaaatataggagacatttcagaaaca gtagttaaaggggattttgtcagtgatgaagacaaaaagcaaaatttgactgatttgattgcaaacagactcaagcataa gaaattgacaatgtctaaaacagttttaaacagaagtagatatttcaaaacggtgacttcgacagttgaggaacttaatc aaggaaattcatctgaagccgcagaacttaatgaaatggaatcagaaggaaaaggaaacatttcattagcggagagagac atgcacgatgattctgaatttgttatcgaagaggtgtcttcaacagtcgaggaaattaatcaagaaaaaacatttgaagc ctctgaacttaatgaaattgaatcagtaagagaaagaaaaatttcattagcagagagaaaccgagaaaaaggaaattcag aatttattgacagaacaatgggtaaagacacaatgggagaggatccaaaaatcaagaaacatggatctgaagagtcaagt gactcattagtgagtaatggtcaagagtcaaatgactcattgttgagtagtggtcaagagttaagtgactctttgttgag taatcgtgaaaaatctagcaactcattgtggagtaatggaaatcataatttacggacagctgaagaattacaaaatgtct taaaccaaaaactgatgaaagctagtaagcagagaatgtcaaatgttcttcttaatagcagacactataaaactatggat gattgtgtcataggtggaacagcttcggagagcaactgtgattcagaggaaaatgagactatgtctcatgatgcagaatt tccagacgagacgagtttaagagattcaaacgataagatagaaacgaaaagcttgataacaacaggggataagtgtgaag attgtattgatagaatagagaaaagatttggcaattccataagtctgagtgaggcagtgcatggtttgtgtaggggtaaa aagatagtagctgaattgatactggaagcggttagtcatcaaaatgaagatgctggtcacagtaggattcaatttgatgc aaacagagttatctgcctttgtttgagtggttctcaccttaaaccaccgactctggtccaggggttaacagtcagtgtac ctgtccatgttatgagtgttatacatcaacgacagagtgaaaaactcagatgtgtgctggtcaatggagatctgaggatg tcatttcatcacaaaggttacaaagacacactgacagctactacagtgtaccacccaggggaatacacagacagacagac agcagagggggcgtggctcaatcagctgattgatatacatactcaggtgggtaataaagacacactgacagctactacag tgtacaatccaggggaattcacagacagacagacaggagagagggcgtggctcaatcagctgattgatatacatactcag gatcacatattgagggaaatcacattgacacctctgtataataactggagtctgtattcttcaccaaatcatcctgtaat cataaaatcctccaaaaagatactccagactgctatttacaaccacccgtgtgagatgggccgtgctaagtttgagacag actttctacatgccctgtatgtgttacagtcaagtatccagactggctatgttataccgggagagggacggacagaacaa agctgttaccaaaaactggtccaggagtctg |
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Protein
| Protein ID | pfu_aug2.0_4465.1_19312.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4465.1_19312.t1 MNRCKIGIENGIQCLVDDNDVAYITDTITLLQSLDLKHPVDQYVLSVCQSFHQSHHHGVKTLLYMIQALVKAASILKEQG VPLSYIRRHMCEGIDICSEHADAIKLPIQLELNDGKEVRKPVILQKNDNLESKQPKNLHVDHRNTTFESQQPIINLEMRE KTTKYHNNDFNDEEDDDDDISWYFQSNDLSGGKTDDSLPTKLNKTLSINHMKIDSEDDVTITSLRQNSDTDSDFDDCFEG IPAYSKVIDGMSTKHTSSNSRESSRLSNITYSAKEHLTENGKYSTSAEMAGDKGKRIDVASSTLNTEALFDQNIGDISET VVKGDFVSDEDKKQNLTDLIANRLKHKKLTMSKTVLNRSRYFKTVTSTVEELNQGNSSEAAELNEMESEGKGNISLAERD MHDDSEFVIEEVSSTVEEINQEKTFEASELNEIESVRERKISLAERNREKGNSEFIDRTMGKDTMGEDPKIKKHGSEESS DSLVSNGQESNDSLLSSGQELSDSLLSNREKSSNSLWSNGNHNLRTAEELQNVLNQKLMKASKQRMSNVLLNSRHYKTMD DCVIGGTASESNCDSEENETMSHDAEFPDETSLRDSNDKIETKSLITTGDKCEDCIDRIEKRFGNSISLSEAVHGLCRGK KIVAELILEAVSHQNEDAGHSRIQFDANRVICLCLSGSHLKPPTLVQGLTVSVPVHVMSVIHQRQSEKLRCVLVNGDLRM SFHHKGYKDTLTATTVYHPGEYTDRQTAEGAWLNQLIDIHTQVGNKDTLTATTVYNPGEFTDRQTGERAWLNQLIDIHTQ DHILREITLTPLYNNWSLYSSPNHPVIIKSSKKILQTAIYNHPCEMGRAKFETDFLHALYVLQSSIQTGYVIPGEGRTEQ SCYQKLVQES |
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