Gene
| Gene Model ID | pfu_aug2.0_4466.1_22563 |
|---|---|
| Locus | scaffold4466.1 : 5277 ... 10525 : - |
| To GenomeBrowser | scaffold4466.1:5277..10525 |
| Genes list of scaffold | scaffold4466.1 |
| Synonym | pfu_aug1.0_14254.1_03471 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4466.1_22563.t1 | 1 | 1 | VWA | 44 | 220 | 3.7e-36 | 124.4 | 2.8e-39 | 5.8e-36 | 123.8 |
| pfu_aug2.0_4466.1_22563.t1 | 1 | 1 | VWA_2 | 44 | 207 | 1.2e-14 | 54.8 | 9.9e-18 | 2.1e-14 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4466.1_22563.t1 | gi|524888849|ref|XP_005100989.1| | PREDICTED: collagen alpha-1(XII) chain-like [Aplysia californica] | 6.0e-28 |
| pfu_aug2.0_4466.1_22563.t1 | gi|524867906|ref|XP_005090760.1| | PREDICTED: uncharacterized protein LOC101856075 [Aplysia californica] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_4466.1_22563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4466.1_22563.t1 atgcccccagtggcatcttttcgaaccttcttcgaaacaagatccaatattgcattatcacgcctcgtactaatttcagc caatgacgacgcagtattacgatcacgtagtgtcctacctcgatgccgagatgttgtttttgtgttagacacgtcaggta gcctgagtcaaagcgacttcaacgaggctgttgatttcgtttacaatgtcacaaaacagctaacgattggtccatccaac attctggtgtctgccgttacattctccacccttgttcggaatgaattcgatctgaaagatcacgtgactgaatcagctat attagctggcatcttgaatctcaaaagaatagttccaaatggaggtacatacacgtttgacgctttgaggtttgtaagta gccattctctgacgtcatcagcaggtgcgcgctctggagtacaaaaagcagttgtcgttcttacagatggcgtgtcggct agtgctatttcaactaaataccaggcccaaaaactacaaaatgacagtgttgaagtttattctataggaataggaaatgt aacactatcaactagtcaggagttggctgatatagccagtgatccggattcctactacctgtacagggtagatcaatatc agtaccttagtgccattgtgtcagatatagtaccaaaactagacagtcaatcatcatcctcaacatcttcgtctctctca tcctctttatatacacaaacaacgactagttcaaccaatggtagctctccttatcaccagcaagttacgcaatttccaga gacttcggcgtcctctatcggcgctgctttaggagcaggtctcactatcttagctcttgtaggtgtcagcaccgtcgctg gaatctatttaaagaaatatatttctagcaagaaaacaccggaacatgatatcgctgacccttgggatgacattataaaa gaatacaaggacgccccactaggacagaagaagccgtatttccatggtgatatatacagagtagaggctgttgaaggcat taaacaagctgatatacaagtccatctggccacgcctaggccctcattttcgcttccattaaagaatgttgactga |
|
Protein
| Protein ID | pfu_aug2.0_4466.1_22563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4466.1_22563.t1 MPPVASFRTFFETRSNIALSRLVLISANDDAVLRSRSVLPRCRDVVFVLDTSGSLSQSDFNEAVDFVYNVTKQLTIGPSN ILVSAVTFSTLVRNEFDLKDHVTESAILAGILNLKRIVPNGGTYTFDALRFVSSHSLTSSAGARSGVQKAVVVLTDGVSA SAISTKYQAQKLQNDSVEVYSIGIGNVTLSTSQELADIASDPDSYYLYRVDQYQYLSAIVSDIVPKLDSQSSSSTSSSLS SSLYTQTTTSSTNGSSPYHQQVTQFPETSASSIGAALGAGLTILALVGVSTVAGIYLKKYISSKKTPEHDIADPWDDIIK EYKDAPLGQKKPYFHGDIYRVEAVEGIKQADIQVHLATPRPSFSLPLKNVD |
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