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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_447.1_24034
Locus scaffold447.1 : 86856 ... 96668 : +
To GenomeBrowser scaffold447.1:86856..96668
Genes list of scaffold scaffold447.1
Synonym pfu_aug1.0_8877.1_31665

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_447.1_24034.t1 gi|156375643|ref|XP_001630189.1| predicted protein [Nematostella vectensis] 5.0e-39
pfu_aug2.0_447.1_24034.t1 gi|676479005|ref|XP_009061609.1| hypothetical protein LOTGIDRAFT_234958 [Lottia gigantea] 1.0e-38
pfu_aug2.0_447.1_24034.t1 gi|524907429|ref|XP_005108832.1| PREDICTED: uncharacterized protein LOC101856131 [Aplysia californica] 2.0e-36
pfu_aug2.0_447.1_24034.t1 gi|390343247|ref|XP_785183.2| PREDICTED: TNF receptor-associated factor 6 [Strongylocentrotus purpuratus] 5.0e-29
pfu_aug2.0_447.1_24034.t1 gi|260828510|ref|XP_002609206.1| hypothetical protein BRAFLDRAFT_125960 [Branchiostoma floridae] 6.0e-28

Transcript
Transcript IDpfu_aug2.0_447.1_24034.t1
Definition-
>pfu_aug2.0_447.1_24034.t1
atgtctgcggaagaatatgagcagagattcaactgcattgtgtgtttatgtcccaagctgtgcatggtgtatggttcgtg
tcagcatagagtgtgtgcagattgtttgtatgatgatgagaacaatcgtagacccagtatgaaggcgtgtcccacatgtc
agagagaggatgctttccctcttctcaggccaaacattcctgaggacacccttgccatacagagatgtcttggagtgagg
gcgtgtactaataaaggatgtggtatggagttctgggagtgggaactggagaatcatatcagagtttgtcctagcagaca
ggaaacccctgatatcaagtcaagaaaagttagcatcacttccttaaacattttacctcaaagaacaaggaatgggcaag
aaaaaccagagggtcgtagagtaacaaggagcagtacatttagtggacgtacacgtcccagtatctctcggcgaatgtca
gccaggctagttctcacacctgtacaagtgaacaataataccaattaa

Protein
Protein IDpfu_aug2.0_447.1_24034.t1
Definition-
>pfu_aug2.0_447.1_24034.t1
MSAEEYEQRFNCIVCLCPKLCMVYGSCQHRVCADCLYDDENNRRPSMKACPTCQREDAFPLLRPNIPEDTLAIQRCLGVR
ACTNKGCGMEFWEWELENHIRVCPSRQETPDIKSRKVSITSLNILPQRTRNGQEKPEGRRVTRSSTFSGRTRPSISRRMS
ARLVLTPVQVNNNTN

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