Gene
| Gene Model ID | pfu_aug2.0_447.1_24038 |
|---|---|
| Locus | scaffold447.1 : 155336 ... 165532 : + |
| To GenomeBrowser | scaffold447.1:155336..165532 |
| Genes list of scaffold | scaffold447.1 |
| Synonym | pfu_aug1.0_3348.1_37567 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cathepsin b | GO:0005515 GO:0005615 GO:0006508 GO:0008234 GO:0009056 GO:0009888 GO:0009987 GO:0031988 GO:0043231 GO:0044444 GO:0044707 GO:0044767 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_447.1_24038.t1 | 1 | 1 | Propeptide_C1 | 29 | 70 | 3.2e-11 | 42.6 | 1.8e-14 | 8.7e-11 | 41.2 |
| pfu_aug2.0_447.1_24038.t1 | 1 | 1 | Peptidase_C1 | 89 | 334 | 0.0 | 215.7 | 0.0 | 0.0 | 215.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_447.1_24038.t1 | gi|524902931|ref|XP_005107685.1| | PREDICTED: cathepsin B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_447.1_24038.t1 | gi|196009263|ref|XP_002114497.1| | expressed hypothetical protein [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_447.1_24038.t1 | gi|260786791|ref|XP_002588440.1| | hypothetical protein BRAFLDRAFT_199166 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_447.1_24038.t1 | gi|676492948|ref|XP_009066087.1| | hypothetical protein LOTGIDRAFT_197490 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_447.1_24038.t1 | gi|147906534|ref|NP_001090927.1| | cathepsin B precursor [Sus scrofa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_447.1_24038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24038.t1 atgaaggtcctcattctcttagcccttaccgcccttgctgtggcagattatgtcttcgattccgagtcgaaagtcttcaa gcctctctctgatgaaatgatctggtttattaacaaagtcaatacatcatggaaagcaggccagaacttccatcacatca agcaagaggacagactcgaccatgttaagattatgtgcggtacataccttgacgttcctccacacctccagcttccagtc agggacattgaaccacgtaaagacctgccagatacctttgatgccaggacacagtggtcaaactgcccaaccatcaagga aattagggaccagggatcatgtggatcatgctgggcctttggtgctgtagaatctatgagtgacagaatctgtattaagt caaacggtcaacagaacgcacatatctctgccgaagatctgacatcatgctgtagaagttgtggaaacggatgtaatgga ggtttcttaagtggagcttgggaatactacaaacgtgacggacttgtcacaggtggtcagtacaacagccaccagggatg ccaaccctacactgtcaaagcctgtgaccatcatgttgtcggcaaactccagccctgcagcaaaaaggaagagcacaccc ccgtctgtaaacatgaatgtgaatcgggatataacgtgtcatacaccaaagacaaacattatggtgccacagcttactct gtaagaggtgtccaacaaattatgacagaaatcatgaccaacggtccagtagagggcgccttcactgtctacgctgattt cccacaatataaatctggtgtatacaagcacaccactggatccccccttggaggtcatgccatcaagatcatgggctggg gaactgagggaggagaagattattggttggttgccaactcatggaatccagactggggaaatcaaggaacatttaaaatc ctcagaggaagggacgagtgtggaattgagtctcagatcgcagctggagaacccaaattatcataa |
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Protein
| Protein ID | pfu_aug2.0_447.1_24038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24038.t1 MKVLILLALTALAVADYVFDSESKVFKPLSDEMIWFINKVNTSWKAGQNFHHIKQEDRLDHVKIMCGTYLDVPPHLQLPV RDIEPRKDLPDTFDARTQWSNCPTIKEIRDQGSCGSCWAFGAVESMSDRICIKSNGQQNAHISAEDLTSCCRSCGNGCNG GFLSGAWEYYKRDGLVTGGQYNSHQGCQPYTVKACDHHVVGKLQPCSKKEEHTPVCKHECESGYNVSYTKDKHYGATAYS VRGVQQIMTEIMTNGPVEGAFTVYADFPQYKSGVYKHTTGSPLGGHAIKIMGWGTEGGEDYWLVANSWNPDWGNQGTFKI LRGRDECGIESQIAAGEPKLS |
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