Gene
| Gene Model ID | pfu_aug2.0_447.1_24039 |
|---|---|
| Locus | scaffold447.1 : 167330 ... 177895 : - |
| To GenomeBrowser | scaffold447.1:167330..177895 |
| Genes list of scaffold | scaffold447.1 |
| Synonym | pfu_aug1.0_13111.1_61152 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_447.1_24039.t1 | 1 | 1 | RIO1 | 316 | 385 | 8.1e-15 | 54.6 | 2.7e-18 | 2.0e-14 | 53.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_447.1_24039.t1 | gi|543252505|ref|XP_005418413.1| | PREDICTED: serine/threonine-protein kinase RIO3 [Geospiza fortis] | 0.0 |
| pfu_aug2.0_447.1_24039.t1 | gi|541956236|ref|XP_005433938.1| | PREDICTED: serine/threonine-protein kinase RIO3 [Falco cherrug] | 0.0 |
| pfu_aug2.0_447.1_24039.t1 | gi|683888929|ref|XP_009100768.1| | PREDICTED: serine/threonine-protein kinase RIO3, partial [Serinus canaria] | 0.0 |
| pfu_aug2.0_447.1_24039.t1 | gi|727009604|ref|XP_010394684.1| | PREDICTED: serine/threonine-protein kinase RIO3 isoform X2 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_447.1_24039.t1 | gi|727009602|ref|XP_010394683.1| | PREDICTED: serine/threonine-protein kinase RIO3 isoform X1 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_447.1_24039.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24039.t1 atgcaactagagcgttgtagacaattatcggcacctttacgttttaccttgcctactggcaggtttcgcagtttagtcga tttccggaaacaggtgatctacaaaccaaaacaaatccagattgcacaacaggaggaaacatcggtatttttagctggca agacagtagacacatccataacgatgtcggctccagcaccttggggaaataccaacattgcccaagtttacaatccctgt tcgttgaaagatgtcatgagtgaacagttagctgcagatctgcagaaggaagaagaacatactaaaaacatatcctcaag tgatatgaaggagccagattttggcgagcttgttgctgctgccgctgccagtggagaagacactgccaatgatttattat tagcacagatgttacaacatgagtttgataaagaacacgaccaacagctgaagagggaggaaagccattataatggaaac aacaaagttgccgtgtcctttcaaaacttccgtgcagtacatccagcttacgatgatgaagaagaagaggaagaagaagt aacagaaagaaaaacagaatgggatgtgtcacctccaagttacaagaaaaacggaacgtcaggaagtggaaaaaatataa caactaagcacgatgctgttatatgtggaagacgcaatgcatccaagctcatggacctacccccagaattccacagcggt gatggcgagggaatggacttgaagctgtctaacaaagtatacaacaaactgaagttacattccgaagcagaaaataaacg gagccagaggttacatgaaaaaaaggagcattccactgcagagcatgtaatggatccgaggaccaagttgttactgtata agatggtaaataacggcacactggattccatcagtggcagtatcagcacaggaaaggaatctgttgtcttccatgcttat ggaggaagtgtaaaggataagacattgtcagaggagtgtgctatcaagatttataagacaacgctgaacgaattcaaaaa cagagaacagtacatacatggagatcataggttctcaaaggatgactataaaaaacacaatccacggaaaattatcaaaa tgtggggagagaaagaaaccgctaatctcaacagacgtttttaccacgagtttttccgtaaaagtggtgttcatgacgta ttgagcccagaagaattattcaaccatatcacagacctcaaaatcaccggtaaaggaaaagacttcgaggctcaggtaca aagatacgacaaagaaaagagcgccgagctcttagccaatcagagcagctttaaaacctacccatttgactatttcttcg agaagtcattgaaagagaggacagaggagtgtgacgatgaaaatttagatgatagggacgatccatttgaatatttttac gaaaaatctttaaaggacaaagaaggtgcggaggcccaagtttcctctgatagtgacagtgacatagatgaaagtagctt tgtattagtggataaagacaaaattaacttgggataa |
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Protein
| Protein ID | pfu_aug2.0_447.1_24039.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24039.t1 MQLERCRQLSAPLRFTLPTGRFRSLVDFRKQVIYKPKQIQIAQQEETSVFLAGKTVDTSITMSAPAPWGNTNIAQVYNPC SLKDVMSEQLAADLQKEEEHTKNISSSDMKEPDFGELVAAAAASGEDTANDLLLAQMLQHEFDKEHDQQLKREESHYNGN NKVAVSFQNFRAVHPAYDDEEEEEEEVTERKTEWDVSPPSYKKNGTSGSGKNITTKHDAVICGRRNASKLMDLPPEFHSG DGEGMDLKLSNKVYNKLKLHSEAENKRSQRLHEKKEHSTAEHVMDPRTKLLLYKMVNNGTLDSISGSISTGKESVVFHAY GGSVKDKTLSEECAIKIYKTTLNEFKNREQYIHGDHRFSKDDYKKHNPRKIIKMWGEKETANLNRRFYHEFFRKSGVHDV LSPEELFNHITDLKITGKGKDFEAQVQRYDKEKSAELLANQSSFKTYPFDYFFEKSLKERTEECDDENLDDRDDPFEYFY EKSLKDKEGAEAQVSSDSDSDIDESSFVLVDKDKINLG |
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