Gene
| Gene Model ID | pfu_aug2.0_447.1_24050 |
|---|---|
| Locus | scaffold447.1 : 303593 ... 319465 : - |
| To GenomeBrowser | scaffold447.1:303593..319465 |
| Genes list of scaffold | scaffold447.1 |
| Synonym | pfu_aug1.0_5788.1_31046 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-tubulin complex component 5 | GO:0015630 GO:0044430 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_447.1_24050.t1 | 1 | 1 | Spc97_Spc98 | 1 | 556 | 0.0 | 233.2 | 0.0 | 0.0 | 232.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_447.1_24050.t1 | gi|512821498|ref|XP_004911872.1| | PREDICTED: gamma-tubulin complex component 5 isoform X2 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_447.1_24050.t1 | gi|699672071|ref|XP_009900916.1| | PREDICTED: gamma-tubulin complex component 5 [Picoides pubescens] | 0.0 |
| pfu_aug2.0_447.1_24050.t1 | gi|512821491|ref|XP_002937030.2| | PREDICTED: gamma-tubulin complex component 5 isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_447.1_24050.t1 | gi|704513084|ref|XP_010081070.1| | PREDICTED: gamma-tubulin complex component 5, partial [Pterocles gutturalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_447.1_24050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24050.t1 gatgttgtcgggcgtcaaagattcctttgtatttgtctacgatggtcagaaacacagagtaagggagaatattggagtca gtcaccttacagataattccttgtacagttcgttagctgattttgccaagtatggtacatttctacacgagttacagtca ttcactgagaacgttgttgatttatcctgcttggcagcgtctgggcgaggggatttggtgtcacagacatatcaagcttt ttgtaataccatctcaactttcctggcaaatatttgtagagaattgacggccctggaagtcaggattaaaaaacaaaaag agattaagactcttgccttacttaaggcagagctgtcaccatggttacacaagatggaggcggtacattctgtctatgta gagggaatagaggaagctgattggctacaaaataactgtcatcgagcatcacatctactcagtgtcctgtacaaagccgt attagagtatgatactttaggacattatgcaaatgaaatgcttgagttgatgctgccaatgtggatacagaccagtaaac cgtatatagacattatagatgagtggattactcacggaaacttagaggatccgatgaaagagttcctcatgagaaggaat gagaacgtaaagacattagacgagaagttttgggaaacgtctttcactgtgttattaccgtcagactctactccttataa gacaccttcaccagacaaaaggctgtctctgaacaggacttcagtaggcacaggtgggttaccctattgggcacctcagt tcttggagccaatcgtattaaaggttgtactagctgggaaatcaatggagatgttacaggatttaggaaagctgtcggag gtactaggtcatgaagggagcaaggagaaatctctgtacataacgttcctggaatctttacaagacatgttaggcaccaa atctatagatatctccgacacccagccgggggacggtgaaaacgtcagcaaggaaatctccctatacatacagcagttag accagcagatgaagatgaaaggagtgtatgatccgttactgaagatgaactttcagaatatatttaccgcatgtatgact cgactaaaggaaggagtacagaacgagtcgtatgaagacagtatgttgagctcaataagcacggacaacttacgccccgt aaacctgatactggagcagtgtttgtacccacacgtggttcagaaatacaccaaagtttgtagtaggctggtacagatac tgaaggaggactatagactcatggactatctggctgctatgaggcaatatttccttatggagtcaggcgatactatgttc gatttctatatgcctctatttgataagatacgacttcatgaacagtggcgagatatttctactgtcaaccttttactaca tgaagctgttcaagtcagatttccagatgacgtgtcaagattaagtgttcaaatagaagacctgcctaaggacaggaaac ccatcaatgtaactgactgtctcaaacttcacttcaaagtaccttggccagtggatgtggtgattaattctcgaagtcag gagatctataatcaaattttcactttcctgttacaagtgaagagggccaagtattgtttggatgaactcagggcctttgg ttatctcaagatttga |
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Protein
| Protein ID | pfu_aug2.0_447.1_24050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_447.1_24050.t1 MLSGVKDSFVFVYDGQKHRVRENIGVSHLTDNSLYSSLADFAKYGTFLHELQSFTENVVDLSCLAASGRGDLVSQTYQAF CNTISTFLANICRELTALEVRIKKQKEIKTLALLKAELSPWLHKMEAVHSVYVEGIEEADWLQNNCHRASHLLSVLYKAV LEYDTLGHYANEMLELMLPMWIQTSKPYIDIIDEWITHGNLEDPMKEFLMRRNENVKTLDEKFWETSFTVLLPSDSTPYK TPSPDKRLSLNRTSVGTGGLPYWAPQFLEPIVLKVVLAGKSMEMLQDLGKLSEVLGHEGSKEKSLYITFLESLQDMLGTK SIDISDTQPGDGENVSKEISLYIQQLDQQMKMKGVYDPLLKMNFQNIFTACMTRLKEGVQNESYEDSMLSSISTDNLRPV NLILEQCLYPHVVQKYTKVCSRLVQILKEDYRLMDYLAAMRQYFLMESGDTMFDFYMPLFDKIRLHEQWRDISTVNLLLH EAVQVRFPDDVSRLSVQIEDLPKDRKPINVTDCLKLHFKVPWPVDVVINSRSQEIYNQIFTFLLQVKRAKYCLDELRAFG YLKI |
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