Gene
| Gene Model ID | pfu_aug2.0_448.1_27403 |
|---|---|
| Locus | scaffold448.1 : 9411 ... 22265 : - |
| To GenomeBrowser | scaffold448.1:9411..22265 |
| Genes list of scaffold | scaffold448.1 |
| Synonym | pfu_aug1.0_1903.1_58685 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_448.1_27403.t1 | 3 | 1 | Mito_carr | 78 | 168 | 0.0 | 218.1 | 1.2e-28 | 5.8e-25 | 86.8 |
| pfu_aug2.0_448.1_27403.t1 | 3 | 2 | Mito_carr | 177 | 267 | 0.0 | 218.1 | 5.4e-23 | 2.7e-19 | 68.6 |
| pfu_aug2.0_448.1_27403.t1 | 3 | 3 | Mito_carr | 275 | 335 | 0.0 | 218.1 | 1.9e-20 | 9.3e-17 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_448.1_27403.t1 | gi|676458965|ref|XP_009055147.1| | hypothetical protein LOTGIDRAFT_232539 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_448.1_27403.t1 | gi|524878167|ref|XP_005095773.1| | PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_448.1_27403.t1 | gi|524878169|ref|XP_005095774.1| | PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_448.1_27403.t1 | gi|578813870|ref|XP_006715897.1| | 0.0 | |
| pfu_aug2.0_448.1_27403.t1 | gi|395818664|ref|XP_003782741.1| | PREDICTED: calcium-binding mitochondrial carrier protein Aralar2 [Otolemur garnettii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_448.1_27403.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27403.t1 atggaaatggatttattacttgtggacttccatgatgagcatgcctcccaggctttcagacgcagagatttaaagaacca aggctccattaacgctaaagactttgaggaaatcatgatgtcattaaagtcatacatgcttacagatttcgttagagata atttagtcacagagaagattaactacgagcagcacacggagaggaccgtattattgcagatagcggagaacgtctaccgg tttgctctcggtgccttggcaggagcaactggagcaacagcagtgtatccaatagatctcgtcaaaaccagaatgcagaa ccagagaactacctcaatggtcggagaattaatgtataaaaatagcttcgactgcttcaaaaaggtgctgcgacacgaag gattctttgggttatacagaggactggctcctcaactggtgggcgtcgccccggagaaagctattaaacttacaatgaat gatttaatgagagacaagctaggaggtcgattccttaacaaggatggatctttacctttatgggcagaaatggtggctgg tggaactgcaggtgcctcccaggtcatgtttaccaatcccctagaaatagtcaagatcagactccaggtggcaggggagg tagtcagtaaaggtcaaaaggtcagcgccattaaagtcgtccgtgaactcggatttctggggctttacaagggttctagg gcgtgttttctaagggacataccattttcagctatatacttccctgcttatgctcgtacaaagaaatggctggctgatga gaacggctataattctcccggtactctactcctggctgccactatagcaggtatgccagcggcagctattcccacaccag ctgatgtgattaagacacgtctacaggtacaagctcgtacaggtcaaaccgcgtataacggtgttatagactgtgtacgg aaaatctggaaagaggagggaggttgggccttctggaaaggcactccaggtaaggactggcatcgttga |
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Protein
| Protein ID | pfu_aug2.0_448.1_27403.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_448.1_27403.t1 MEMDLLLVDFHDEHASQAFRRRDLKNQGSINAKDFEEIMMSLKSYMLTDFVRDNLVTEKINYEQHTERTVLLQIAENVYR FALGALAGATGATAVYPIDLVKTRMQNQRTTSMVGELMYKNSFDCFKKVLRHEGFFGLYRGLAPQLVGVAPEKAIKLTMN DLMRDKLGGRFLNKDGSLPLWAEMVAGGTAGASQVMFTNPLEIVKIRLQVAGEVVSKGQKVSAIKVVRELGFLGLYKGSR ACFLRDIPFSAIYFPAYARTKKWLADENGYNSPGTLLLAATIAGMPAAAIPTPADVIKTRLQVQARTGQTAYNGVIDCVR KIWKEEGGWAFWKGTPGKDWHR |
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